Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2518 ATGAATTTGAATCTAATGAAGTTCCTGAGACGCTCGGGTGTAGATCAGGTCTTTTTTGGGTGTATTTTTGCTAGAAGTGTGGGTGTGTATTATATCAGACATGATTGGCCTCTCTCTGTTGTTGATGATCAGTTTATTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTAGAAAAATTTTACAGGAACTACGCCAAGGCTGCAGGAAGGGAAACGAGATTAAGAATCAATTAATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACGAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCTTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAACGAGGAGGCCGGTATCAGACCAAGCAAAACCTACTAA 516 0.4186 MNLNLMKFLRRSGVDQVFFGCIFARSVGVYYIRHDWPLSVVDDQFIPKVGMTFTTLEDARKILQELRQGCRKGNEIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEAGIRPSKTY* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2518 171 Pfam FAR1 DNA-binding domain 70 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2518 Amo-Chr6 88118899 88119833 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo06g2518 FAR1 1.6e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2518 - - adu:110280446 243.432