Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2499 ATGATATCTGGTGTTATACCACCTAAGCTGTTTCAGCTCACGAACTTAGTCTCTGTTCATCTTTCTAACAATCAATTGGGTGGAAACATACCATCAGAGATAAGAAATTTTGATTCTTTTTGTCACGTAAACCTATCAAATAACAAGTTAGAAGCATTGATCCCATCTCCGATACTAAATTGTTTCATGAGTTTTGGAAAAGTAGACTTGAGTAATAATGTGTTAAGTGAAAATATTCCTTCAAAAATCGTAGTAATGTACCCTTTTTGTCCATTAATGATAATCCTTATATTCCTTGGAGAGAATTTTCTTTATCAAATTTGGATTTTAGCTACAATAATCTCAGAGTCTGTTAACTCTTCCGTTCAAGTTCAAAAAATAAAAAAACTAAGCAACCTAATTGTAATTGCTCTTCCCATCACTTGTTGCTTCTTACTTATCATTTTTGTGGGCATATTATGTTATATTCGATGCACCAACAAAAACTATGATGGAAAAATTGCATTTGAAGACATCATCGAAGCAACACAGGATTTTGATATCAGATACTGCATAGGAACTGGCGCTTATGGCAGTGTGTACAAAGCCCAACTTCCAAGTGGCAAAATCGTTGCATTGAAGAAAGTTCACCTAAGAGAGTCACAAAATCCATCTTTTGACAAGAGCTTCCACAACGAAGTTAAGATGTTATCACAAATTTGTCATAGAAACATTATCAAGCTTCATGGATTTTGTCTCCACAATCGATGCATATTTTTGGTATACAAATGCATCGAACAAGGAAGTTTATTTTATGCCTTAAACATGGATGATGTAGTAACCAAAAGAGAGAGGGAAAAAAAAAGAAGAAAGGCCGAGCACGTCATGACAGATGATGATGAAGCTAAGGATCTAAGTTGGAACAAAAGGGTGAATATCGTTAGTGGAACAGCTAATGTTTTGGCTTCCATGCATCATGACTGTTTCTCACTGATAAGTTGCATATTGTTGTCTCGGACTTCGGAACTGCTAGACTTCTTGATCTTGATCTTCAAATCAAACATTATAAGTTGGAACATATGGATACTTGCACCAGTCTGTGCTGCAAAATTGGCCTATACAATGACTGTGACAAAAAAGTGTGATGTTTACAGCTTTGGAGTAGTGGCATTGGAAACATTAACGGGAAGACATCCAGGAGATCTAATATTTTCATTGTTCAACTCGTCTAACAAAAACATAATGATAAAAGATCTATTGGATTCACGCATTCGCTTATCATTATGTCAAAGAGACACTCAAACAATAGTTCAAGTACTAACATTGGCATTGGCATGCTTGCGCTCTGATCCAATGTCAAGATCATCAATGCAGCAAGTGGCATATGAACTTTCTAATTTTGAACAATTATCATTATACTGCATAGGAACTGGTGCATATGGCAGTGTGTATAGAGCACAACTTCCAAGTGGCAAAGTTGTTGCATTGAAGAAACTTCATCAATTGGAGTCTCAAAATCCTTCTTTTGACAAGAGTTTCCGCAATGAGGTCAAGATGTTAACACAAATCATCCATAGAAACATTGTCAAGTTTCATGGATTTTGTCTTCATAATCGGTGTATGTTTCTAATTTATGAATACATGGAAAGAGGAAACTTATTTTATGCCTTGAGAATTGATGATGAAGCTGAGGAGCTAAGTTGGAGCCAAAGAGTGAATATCGTTAGTGGAACAACTAATGCTTTGTCTTACATGCATCATGATTGTTCCCCAGCAATAGTTCACAAAGATTTGCATGTTGTTGTCTCAGACTTTGGCACAGCTAGACTTATTGATCCTGATTCTTCAAACCAAACCTTGCAAGTTGGAACATACGAATATCTTGCACCAGAATTGGCCTACATGTTGACTTTGACAGAAAAATGTGATGTATACAATTTTGGAGTGGTGGCATTGGAAACATTAATGGGAAGACACATGGGAGATCTAATCTCGTCTTTGTTCGAATCTTCTAGCAAAAACATAATAGTAAAAGATCTCTTGGACTCACGCATCCATTTACCATCATGTCAAAAAGACATTCAAGTTATAGTTCAGGTGGTAACATTGGCATTGGCATGCTTGCACTCTAATTCAAAGTCAAGACTATCAATGCAGCAAGTGGCTCATGAACTTTCTAATTTCAAACAATCATCACTGATTTTGCCTTTGTCTGAAATCACAGTCCAACAGTTGATAGCTTAG 2223 0.3612 MISGVIPPKLFQLTNLVSVHLSNNQLGGNIPSEIRNFDSFCHVNLSNNKLEALIPSPILNCFMSFGKVDLSNNVLSENIPSKIVVMYPFCPLMIILIFLGENFLYQIWILATIISESVNSSVQVQKIKKLSNLIVIALPITCCFLLIIFVGILCYIRCTNKNYDGKIAFEDIIEATQDFDIRYCIGTGAYGSVYKAQLPSGKIVALKKVHLRESQNPSFDKSFHNEVKMLSQICHRNIIKLHGFCLHNRCIFLVYKCIEQGSLFYALNMDDVVTKREREKKRRKAEHVMTDDDEAKDLSWNKRVNIVSGTANVLASMHHDCFSLISCILLSRTSELLDFLILIFKSNIISWNIWILAPVCAAKLAYTMTVTKKCDVYSFGVVALETLTGRHPGDLIFSLFNSSNKNIMIKDLLDSRIRLSLCQRDTQTIVQVLTLALACLRSDPMSRSSMQQVAYELSNFEQLSLYCIGTGAYGSVYRAQLPSGKVVALKKLHQLESQNPSFDKSFRNEVKMLTQIIHRNIVKFHGFCLHNRCMFLIYEYMERGNLFYALRIDDEAEELSWSQRVNIVSGTTNALSYMHHDCSPAIVHKDLHVVVSDFGTARLIDPDSSNQTLQVGTYEYLAPELAYMLTLTEKCDVYNFGVVALETLMGRHMGDLISSLFESSSKNIIVKDLLDSRIHLPSCQKDIQVIVQVVTLALACLHSNSKSRLSMQQVAHELSNFKQSSLILPLSEITVQQLIA* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2499 740 Gene3D Phosphorylase Kinase; domain 1 468 541 - -
Amo06g2499 740 Gene3D Transferase(Phosphotransferase) domain 1 542 728 - -
Amo06g2499 740 SUPERFAMILY L domain-like 2 89 - -
Amo06g2499 740 Pfam Protein kinase domain 184 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2499 740 Pfam Protein kinase domain 468 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2499 740 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 463 738 - -
Amo06g2499 740 ProSiteProfiles Protein kinase domain profile. 179 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2499 740 Gene3D Transferase(Phosphotransferase) domain 1 285 466 - -
Amo06g2499 740 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 288 458 - -
Amo06g2499 740 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 272 - -
Amo06g2499 740 ProSitePatterns Protein kinases ATP-binding region signature. 468 490 IPR017441 GO:0005524
Amo06g2499 740 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 2 272 - -
Amo06g2499 740 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 288 458 - -
Amo06g2499 740 Pfam Protein tyrosine and serine/threonine kinase 367 456 IPR001245 GO:0004672|GO:0006468
Amo06g2499 740 ProSiteProfiles Protein kinase domain profile. 462 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2499 740 ProSitePatterns Protein kinases ATP-binding region signature. 185 207 IPR017441 GO:0005524
Amo06g2499 740 Gene3D Ribonuclease Inhibitor 1 88 IPR032675 -
Amo06g2499 740 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 463 738 - -
Amo06g2499 740 SUPERFAMILY Protein kinase-like (PK-like) 168 456 IPR011009 -
Amo06g2499 740 SUPERFAMILY Protein kinase-like (PK-like) 466 718 IPR011009 -
Amo06g2499 740 Gene3D Phosphorylase Kinase; domain 1 155 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2499 Amo-Chr6 87648496 87653799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2499 2 83 Receptor kinase-like Gene Family AT4G08850 34.146 1.47e-07 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo06g2499 Pkinase 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2499 - - csin:114315919 419.083