Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2497 ATGCAGTCAGAAGTCAGCTTCTTAGGAAGGATTTCTCACCCAAATCTTGTTAAGCTTTTGGGTTATTGTAGAGAAGCTGATGAACTTCTCCTTGTTTACGAGTTTATGCCTAAGGGAAGCTTGGAGAGCCATCTCTTCAGAAGAAACTCTAATACAACAGAACCAATTTCTTGGAACACTCGTCTCAAAATAGCCATTGATGCTGCTAGAGGCTTGGCCTTCTTGCATACTTCAGAAAAGCAAGTTATATATAGAGATTTTAAGGCCTCCAATATATTATTAGATGGGGATTACAATGCAAAGATTTCGGATTTTGGATTAGCTAAATTGGGGCCTGCTGGAGGAGAATCACATGTGAGTACCAGAATCATGGGCACCTATGGTTATGCTGCTCCAGAATACATAGCAACTGGTCATTTGTATGTGAAAAGTGATGTGTACGGATTTGGTGTAGTGCTGCTTGAAATGCTGACAGGGCTGAGAGCACTTGACACAAAGAGACCAACAAATCAGCAGAACCTTGTTGAATGGAAGAGGCATTCACTCTCTGATAAGAAGAACATTAATAAGAACATCATGGATCCAAGAATTGAGGATCAATACTCAGTCAAAGCTGCAACACAAGCAGCTCAACTTACCCTTAAATGCCTTGAACCTGTCCCCAAGAACCGCCCTTCTATGAATGAAGTCTTGAAGTCTTTGGAATCCATTGCTGCTATCAAACATAGAACCTCCAAGAAGCCTTCCAAGAAATTAAACACCATGCATAGTGCTAATTAA 780 0.4077 MQSEVSFLGRISHPNLVKLLGYCREADELLLVYEFMPKGSLESHLFRRNSNTTEPISWNTRLKIAIDAARGLAFLHTSEKQVIYRDFKASNILLDGDYNAKISDFGLAKLGPAGGESHVSTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLRALDTKRPTNQQNLVEWKRHSLSDKKNINKNIMDPRIEDQYSVKAATQAAQLTLKCLEPVPKNRPSMNEVLKSLESIAAIKHRTSKKPSKKLNTMHSAN* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2497 259 PIRSF ILK 1 254 - -
Amo06g2497 259 ProSitePatterns Serine/Threonine protein kinases active-site signature. 82 94 IPR008271 GO:0004672|GO:0006468
Amo06g2497 259 Pfam Protein kinase domain 2 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2497 259 Gene3D Transferase(Phosphotransferase) domain 1 37 258 - -
Amo06g2497 259 SUPERFAMILY Protein kinase-like (PK-like) 2 240 IPR011009 -
Amo06g2497 259 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 2 247 - -
Amo06g2497 259 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2497 259 PANTHER OS01G0588500 PROTEIN-RELATED 2 247 - -
Amo06g2497 259 Gene3D Phosphorylase Kinase; domain 1 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2497 Amo-Chr6 87616585 87618972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2497 4 234 Glycoside Hydrolase AT3G07070 50.431 2.10e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo06g2497 Pkinase 2.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2497 - - pvy:116127793 380.948