Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2465 ATGGAGTCGGTGTCTGCAAGTGGTATAAGTTCTTCTTCACCTTCACAAAACTCTGGAATACATTCTAGGAGTCACGCTGGAAAACGAKCAGGTGGATCATCCCACTCATCAGGGAAGACAGCAGGAATGCTTTCCTCTCATAGACATCAACAGAATCCTGTGTCTGCAAATTATCCTGGAAGTTCCCCTCCACTGGGAAGGAGATCTCAGATGGTGAATGGCAATTACTTGCTGAATTTTCAGTATGATCCAATATCCCGTTCTCAACCAAGAGGGCCTCCACCTCCTCTTCCAAGAAGGCAACGGAAGAGAAGGCCATACAACAAGGATTTGTTTCTGCAGGCAAATTACAGATTCATGGTCCTAGATACAGGAAATTATTCTCCCCAGTCGATGGATCCAGATAAAATGTTGCAGTGGGAGGATATTATATGTGTGACATATTCAACCCCCTTCCCAGTTCAGTGCCCAATTTGTTTGGAGTATCCTCTGTGTCCCCAGATAACCTCATGCGGGCATATTTTTTGTTTCCCATGTATACTACAGTACTTGATGCTGGGTGAAGAGGATCACAAAGGTGATTGCTGGAAAAGGTGTCCTTTATGCTTTGTGATGATATCTGTCAAGGATTTGTATACTGTCCACATAACAAATGTCAAACAATATCAAGTAGGGGATAATATTGAGTTCACATTTTTAACACGAAAAAAGGATTCATTTACTTTATCTCATAAAAATAAACAAGAGACAGATATTGCATCAAGTAGCRATGGAGATTTATGTGATCCGTTTTCCAAGTTCACACTCACATCAGATGTAGATCTCTCTGTTAGACACGCAATATCAGATCTAGATGGCTGGCTGGCCAGAGCTGATTCAGGGCTTGTCGATGACCTGGAGAAGCTTCCATATGTTTGTGCTGCAATGCAACAACTAAAACAAAGGAAGAAATATTGGAATGAACATAGGGCTTCTGACATTTCTTCAAGGCTTATTGATTCTGAACATCAGATACAATTGACAGCTGCAAATGCTGTGGATGCTGATGGTGAAACCCATTCTAATGGATCAAGGATTTCCACTGTAGATTTCCAGGACCAAAGTAAGGGAATAATATTGGATAAGTCAACTGCTGAAGCCTGTCCACATCAAACTTTGGASGGAGAGAAATTGATAGAACAAGAAATCAATCCATCCTCATCATATGAGGAGAAGAATGGTGTTCAAAGGCATTCAAATGGAATTGGAGAGACGAAGGAAAGTGATTCTTACAATTTCTTYCAGGCTGTGGATGGCCAGCATATAATTCTCCATCCACTGAACACGAAATGTTTACTTCATCATTATGGGAGTTATGACATGCTTCCACACAGAATAACGGGAAAGATTCTGCAAATGGAAACGGTTACCCAGTCCGAGGCCATGAGGAGGCGATATAAATTCTTAAGTCATTTTCCGTTGACAACAACTTTTCAGCTKTGTGAAATTGATTTGAGTGAGATGTTGCCTCCTGAAGCACTGGCCCCATTTATGGATGAAATAAAGAAGCGYGCACACCAGAGGAAACAACTCGCAAAGAAGGAGCAAAAGGAAAAATTCAAGGCGGAAGCTGCTGCCGCTTATTCTTTTCCCATTCCAAGTTATAAACTTGCTTCGTATGATGACACTCCAACATTTTCTATGGATGACTTTGAAGCCTTGGGAAATTCAGCTATGTCATCAAGTCCTCCAGTTGTTGGGGAAAGAAAAACATTCTCAAATGTTACCCGGCTTGGATTCGCTGCTGCTCATGATTCTCCATCCTTACAAATCCAAGAAACCAGCAGTACCCATAATAAYAATACGGTCACTAGTCCTACTGGCACAACAGGTCCGAGAAATGTGGAGACACCATCATATTCCAATGTTACATCCAGAGCCGAATCAAATGTAAACATGAATGCACCAAACACAAATGACTTTGGGAAGAAGCGGAAAAAGCAAAATCGAGTTCTCCTATCGACATCTGGTGGCAGGCGTTACTGA 2025 0.4158 MESVSASGISSSSPSQNSGIHSRSHAGKRXGGSSHSSGKTAGMLSSHRHQQNPVSANYPGSSPPLGRRSQMVNGNYLLNFQYDPISRSQPRGPPPPLPRRQRKRRPYNKDLFLQANYRFMVLDTGNYSPQSMDPDKMLQWEDIICVTYSTPFPVQCPICLEYPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDCWKRCPLCFVMISVKDLYTVHITNVKQYQVGDNIEFTFLTRKKDSFTLSHKNKQETDIASSSXGDLCDPFSKFTLTSDVDLSVRHAISDLDGWLARADSGLVDDLEKLPYVCAAMQQLKQRKKYWNEHRASDISSRLIDSEHQIQLTAANAVDADGETHSNGSRISTVDFQDQSKGIILDKSTAEACPHQTLXGEKLIEQEINPSSSYEEKNGVQRHSNGIGETKESDSYNFFQAVDGQHIILHPLNTKCLLHHYGSYDMLPHRITGKILQMETVTQSEAMRRRYKFLSHFPLTTTFQLCEIDLSEMLPPEALAPFMDEIKKRAHQRKQLAKKEQKEKFKAEAAAAYSFPIPSYKLASYDDTPTFSMDDFEALGNSAMSSSPPVVGERKTFSNVTRLGFAAAHDSPSLQIQETSSTHNNNTVTSPTGTTGPRNVETPSYSNVTSRAESNVNMNAPNTNDFGKKRKKQNRVLLSTSGGRRY* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2465 674 PANTHER RING FINGER 10 FAMILY MEMBER 13 671 IPR039739 -
Amo06g2465 674 ProSitePatterns Zinc finger RING-type signature. 171 180 IPR017907 -
Amo06g2465 674 MobiDBLite consensus disorder prediction 1 70 - -
Amo06g2465 674 Pfam Zinc finger, C3HC4 type (RING finger) 156 202 IPR018957 GO:0046872
Amo06g2465 674 CDD RING-HC_RNF10 156 203 - -
Amo06g2465 674 ProSiteProfiles Zinc finger RING-type profile. 156 202 IPR001841 -
Amo06g2465 674 SMART ring_2 156 202 IPR001841 -
Amo06g2465 674 MobiDBLite consensus disorder prediction 600 652 - -
Amo06g2465 674 MobiDBLite consensus disorder prediction 597 674 - -
Amo06g2465 674 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 252 IPR013083 -
Amo06g2465 674 SUPERFAMILY RING/U-box 155 209 - -
Amo06g2465 674 Coils Coil 511 531 - -
Amo06g2465 674 MobiDBLite consensus disorder prediction 83 105 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2465 40 624 C3H Transcription Factor Family AT3G26730 57.048 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2465 - - adu:107494651 1258.82