Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2421 ATGCTCATTTCCTTGCGTCGTCAGAAGGTCGTTTCAGAGTTGTTGGTCGCGTTGCCGTCTCTGCCCTCGTTGTCAAGCCCGGACCTATCCTCGTCGTCAAGCTCGGACCTATCCTCGTCGTCGTCGGTTCATAGTTGCTGCTCGCCCGTCTTCTGTTCTCCTAGATTAGCATCAAGCTTCGCGTTGCATATGCAACGGAGATCTCCACTCGATTTGTGTTATCTCTCTTTATTCGACATCTGTTCTCAACTACTCTGCCTCCTCGTTGAGATCCGGCTTCAATTTCTCTCCAACGATGCCGACATTAATCTCAGGGAAAAGCACTTTAGTATCAAAAGGCAATGTGAATTTTTATATCAAAGCTTGTGCATGATGCCTTTGAAATTGATTGAATGTGTGCTGCCATGGTTGATTGGATCATTGACTAAAGATCTGAAAAATATCTCCAGCAACAGAATTTGCTGTAGTCACACTACTTTTGTGGTTGGGCTTGCAAGGCTCATAACTATGAGCACATTTCACATTTTAATGAAGAGGCACACTCTCCATACAACAAGAAGTAGAAGACCATCATACATCCAGGAGAGGTACAAAGGATTCAAA 603 0.4444 MLISLRRQKVVSELLVALPSLPSLSSPDLSSSSSSDLSSSSSVHSCCSPVFCSPRLASSFALHMQRRSPLDLCYLSLFDICSQLLCLLVEIRLQFLSNDADINLREKHFSIKRQCEFLYQSLCMMPLKLIECVLPWLIGSLTKDLKNISSNRICCSHTTFVVGLARLITMSTFHILMKRHTLHTTRSRRPSYIQERYKGFK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2421 201 PANTHER CHY ZINC FINGER PROTEIN 80 150 - -
Amo06g2421 201 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 80 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2421 Amo-Chr6 85407220 85409954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2421 80 151 C2H2 Transcription Factor Family AT3G18290 46.154 3.25e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2421 K16276 - pop:7466888 75.8701