Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2406 ATGTTTTCGTGGTTGGCAAGGATAGTTTCGGCGTGCTTGAGGCCAGTAGTGAGGCGATATGCGCGTATGAACAAGGATGATGATCGCGATCTCGATGACGATCCCTCTTCTCTTCACGATTCYCTGTTATGGTGCAGGGATCTCGARAAGCACTCGTGCGGTGAGTTTTCTTTTGCTGTTGTTCAGGCAAATGAAGTGATTGAGGATCACAGCCAGGTTGAGACAGGTCCCGACGCCGTGTTTGTTGGTGTTTACGACGGACATGGAGGCCCTGAGGCCTCTAAGTTCATCAATGAACACCTCTTCCGCCACCTCATCACGATTGCACAAGAAAATGGTTCTATCTCCGAAGATATTATCAGGGGTGCTGTTTCTGCTACTGAAGATGGTTTTTTAACTCTCGTCCGAAGGAGTTACGGGATAAAGCCATTGATAGCGGCAATGGGTTCCTGTTGTCTGGTTGGTGTTATCTGGAAAGGCACACTGTATACTGCCAATCTTGGAGACTCTCGTGCTGTAATTGGCTCTGTAACCAGATCTAACAAGATAGTTGCAGAACAGTTGACTAGAGAGCACAACGCTAGCAAAGAGGAGGTTAGACGAGAACTCAGGTCTTTGCACCCTGAAGATTCACAAATTGTAGTTATGAAGCATGGAACGTGGCGAATTAAAGGCATCATCCAGGTATCCAGATCAATAGGAGATGCATATCTAAAGCGCCCAGAGTTCTCTTTTGATCCTTCGTTCCCACGGTTCCACCTGCCCGATCCTATCCGTCGGCCTGTGCTAACAGCAGAACCATCTGTGTGTTCACGAGTTTTACAACCTAATGATAAATTCCTTATATTTGCATCTGATGGTCTTTGGGAACACTTGACAAATCAGGAAGCAGTTGAGATTGTTCACAAAAGTCCTCGACCTGGGATTGCAAGGAGACTTCTCAAGGCTGCACTAAWCGAGGCAGCTCGGAAAAGAGAGATGAGATATAAAGACCTTCAAAAGGTTGAAAAGGGGGTTCGGCGGTTTTTTCATGACGATATCACGGTGGTTGTTATCTTCATTGACCATGAATTGGTTGGGAAGAATGTAACAGTTCCTGAATTGTCCATCAAAGGGTTTATGGACTCGGTTGGACCATCGAATTTTAGAAGCTTTCAGCATATGCCATAA 1170 0.4581 MFSWLARIVSACLRPVVRRYARMNKDDDRDLDDDPSSLHDSLLWCRDLEKHSCGEFSFAVVQANEVIEDHSQVETGPDAVFVGVYDGHGGPEASKFINEHLFRHLITIAQENGSISEDIIRGAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVIWKGTLYTANLGDSRAVIGSVTRSNKIVAEQLTREHNASKEEVRRELRSLHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPDPIRRPVLTAEPSVCSRVLQPNDKFLIFASDGLWEHLTNQEAVEIVHKSPRPGIARRLLKAALXEAARKREMRYKDLQKVEKGVRRFFHDDITVVVIFIDHELVGKNVTVPELSIKGFMDSVGPSNFRSFQHMP* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2406 389 PANTHER ALPHABET, ISOFORM E-RELATED 6 375 - -
Amo06g2406 389 SUPERFAMILY PP2C-like 61 355 IPR036457 -
Amo06g2406 389 CDD PP2Cc 56 354 IPR001932 -
Amo06g2406 389 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Amo06g2406 389 Pfam Protein phosphatase 2C 74 320 IPR001932 -
Amo06g2406 389 ProSiteProfiles PPM-type phosphatase domain profile. 55 354 IPR001932 -
Amo06g2406 389 Coils Coil 185 205 - -
Amo06g2406 389 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 375 - -
Amo06g2406 389 SMART PP2C_4 49 352 IPR001932 -
Amo06g2406 389 Gene3D - 39 363 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2406 Amo-Chr6 84955564 84960519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2406 1 385 PP2C-type Phosphatase Gene Family AT5G06750 71.684 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2406 K01102 - gmx:100778238 649.818