Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2362 ATGGCAATGACAAATGGAAACAGCGGCGGTTTCAAAGTAAGCGTGAAGCTAACAAGTGAACCAAGTCTAGTTGCTCCAGCAGAAGAAACAAAGAAAGGAATGTATTTTCTATCTAACCTTGACCAGAACATTGCGGTGATCGTGAGAACCGTATACTGCTTCAAAAGCGCGGAGAGGGGGAACGAGAAGGCGGCGGTTGTGATGAAGAACGCGTTGAAGAAGGTGCTTGTAGAGTATTACCCTCTTGCTGGGAGGCTGAGCATAAGTTCAGAGGGGAAGCTTATAGTGGACTGCACAGGTGAGGGTGCACTGTATGTGGAAGCTGAAGCAAACTGTGAAATGGAAGAGATTGGTGATATCACAAAGCCAGACCCTGCTACTCTTGGTATGTTGGTTTATAACATACCTGATGCAAAGCACATACTTCAGATGCCTCCTTTGGTTGCCCAGGTGACTAAGTTCAAGTGTGGAGGATTCTCTGTTGGATTGTGCATGAACCACTGCATGTTTGATGGAATAGGAGCCATGGAGTTTGTGAACTCATGGGGAGAAGTAGCAAGAGAGCTTCCACTCTCAATTCCTCCATTCCTAGACAGAAGCATTCTGAAGGCAAGGGAGCCACCAAAGATAGAGTTTATTCACAAAGAATTTGCTGACATAGAAGACAAGTCAAGCACCAACACCTTGTATGAAGATGACATGGTTTATAGGTCCTTCTGCTTTGACCCTGAGAAGCTCAAGAGCCTCAAGGCTAAGGCAATGGAAGATGGGGTTCTTGATTCTTGCACCACTTTTGAAGTGCTCTCTGCGTTTGTCTGGATTGCAAGAACCAAGGCTCTCAAGATGTTGCCGAACCAAGAGACTAAGCTTCTCTTTGCTGTTGATGGCAGGGCCAAGTTTAATCCTCCTCTTCCCAAAGGATATTTTGGAAATGGAATTGTGCTCACAAATTCTGTCTGCCAAGCAGGTGAACTTACAGAAAAGCCCTTCTCGTATGCTGTGAGTCTAATTCAAAATGCAATAAAGATGGTGACAGACAGTTATATGAGATCAGCAATAGATTATTTTGAGGTGACAAGGGCAAGGCCATCACTGGCATGCACCCTTTTGATCACAACATGGTCAAGGTTGTCATTTCACACCACTGATTTTGGTTGGGGTGAGCCTGTTCTCTCAGGCCCAGTTTCATTGCCTGAGAAGGAAGTCATCTTGTTCCTCTCTCATGGCATTGAGAGGAGAAACATCAATGTCCTTCTTGGTTTGCCTGCTCCTGTCATGAAGATCTTCCAAGACTTGATGCAGATTTAA 1308 0.4511 MAMTNGNSGGFKVSVKLTSEPSLVAPAEETKKGMYFLSNLDQNIAVIVRTVYCFKSAERGNEKAAVVMKNALKKVLVEYYPLAGRLSISSEGKLIVDCTGEGALYVEAEANCEMEEIGDITKPDPATLGMLVYNIPDAKHILQMPPLVAQVTKFKCGGFSVGLCMNHCMFDGIGAMEFVNSWGEVARELPLSIPPFLDRSILKAREPPKIEFIHKEFADIEDKSSTNTLYEDDMVYRSFCFDPEKLKSLKAKAMEDGVLDSCTTFEVLSAFVWIARTKALKMLPNQETKLLFAVDGRAKFNPPLPKGYFGNGIVLTNSVCQAGELTEKPFSYAVSLIQNAIKMVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGIERRNINVLLGLPAPVMKIFQDLMQI* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2362 435 Gene3D - 217 434 IPR023213 -
Amo06g2362 435 Pfam Transferase family 21 432 - -
Amo06g2362 435 Gene3D - 15 216 IPR023213 -
Amo06g2362 435 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 15 434 - -
Amo06g2362 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2362 Amo-Chr6 83760590 83764060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2362 22 433 Monolignol Biosynthesis Gene Families AT5G48930 35.597 3.09e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2362 K15400 - gmx:100792433 776.933