Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2360 ATGATCAATTCACTATGTGGAAGCTCAGTGTCTCTCAAAAGTGAGAATTCAAGCACAAAGCTACAGCCCACTTCTTCAAATGACTCAGTTTTACAATCAAATAAGAAAAACAATGCTACACAATCCTCTGTTGATTTATTAGAACAGAATAATAACAGTACCCTAACACCACCAAGCTTAAACCTTCCAGGACTCAAATTTGACCTTGATGGAGATGTTGAAGTCCAATCACCAGATAGTTCAATGTGGGAATCCTTTTTCTCTGATCAGTTAGATACTGATTTCATGATGTGTTCCCCAGTGAGGAATGTCCCTTCCCCACAACAAGCCTCAACTTACAATTGCAATTACAATTACGCTCATTCAATGCAAGCACAAAGCTTTTCCGGCTGCTCTCCGCCGCGGTTTTTGGCCCAAATCGGCGCCTACAATAGTAGCGGTGGAGGCGGCGGAGGAAAAGGGAAAGGGCTTAGTCCACTCCACAGGGTGTTCAACTCACCAAACAATCAGTACATGCAGCATGTTGAGAATCTTTCACTGCCTGCAATTGAGGAGTTCTTGGAAGAGTTTCAACAAGGGGAATACTCATCGATAACCGCCGCAAATAACAGCAGCAAAGTTGGTGACGGTTCTGATATTGTTGGAAGTTCTTCTGAATGCTTTGAGTTGGGGAATTTGATTCCTTCGGCGAGTGAAGAGTCGTCGGTGCAAGAGAATGAGATCTACCATCACATGGGTTCCATGGTCAGTGCATCGCTTTCCCAAGCGTTGCAACAAGAACGATATCATGAGAAGCAACAGAAGCAACAAGTACAACAACAACAGCATCCACACTCACATCAACACCATCAAAATTTGATGGTTCCTATTCCACTTGGACTAGAACAGGTAGTAGAACAAGAGAGTGGGTTGCAACTGGTGCACCTGCTTCTAGCATGTGCAGAGGCAGTGGCCAAAGAGGAATACATGCTGGCAAGGAGGTACCTCCAACACCTCAACAGAGTCGTAACACCCCTTGGCGACTCCATGCAACGCGTCGCTTCATGCTTCACTGAGTCTCTAACCGCAAGGCTAGCCACAACATCCACCTCCAATAATGCCAACCCCACACCTTCCTCCACTTTCCCACACTCAAACTCCATGGAAATCCTCAAGATCTACCAGATCGTCTACCAGGCCTGTCCCTATATCAAATTCGCCCACTTCACTGCCAACCAGGCCATCTTCGAGGCCTTCGAGGGCGAAGAGCGGGTCCACGTCATAGACCTCGACATACTCCAGGGATATCAGTGGCCCGCCTTCATGCAGGCCCTGGCCGCCCGATCTAGTGGTGCTCCATTTCTGCGGATCACCGGGGTCGGGCCTAGCATCGAGTCTGTCAAGGAGACAGGCCGATGCCTCACAGAATTGGCCCACTCGCTACGCATCCCTTTCGAATTCCACCCCGTCGGGGAACAACTGGAGAATCTAAAGCCTCACATGTTCAACCGCCGAGTCGGCGAAGCGCTGGCCGTTAATACCGTTAATCAGCTCCACCGTGTCCCCGGTAACGCCCTCGGCAACTTACTCACCATGATAAGGGACCAAGCACCGAGCATAGTGACTCTAGTCGAGCAAGAAGCTAGCCATAACGGGCCTTATTTTCTTGGGAGGTTCTTGGAGGCATTGCATTATTATTCTGCGATTTTCGATTCCTTGGACGCGACGTTTCCACCGGAATCGGCGCAGAGGGCGAAGGTGGAGCAGTACATCTTCGCGCCGGAGATAAGGAACATCGTGGCGTGCGAGGGGCAAGAAAGGGTGGAGAGGCATGAGAGGCTCGAAAAGTGGAGGAAGATCATGGAAGGGAAAGGGTTCAAAGGGGTTCCACTGAGTCCGAACGCGGTGACTCAGTCGAAGATCTTGCTGGGTCTGTATTCTTGCGATGGATATCGGCTTACTGAGGACAAGGGTTGCTTGCTTCTTGGCTGGCAGGATAGGGCCATAATTGCTGCATCGGCTTGGCGCTGCTAA 2013 0.4983 MINSLCGSSVSLKSENSSTKLQPTSSNDSVLQSNKKNNATQSSVDLLEQNNNSTLTPPSLNLPGLKFDLDGDVEVQSPDSSMWESFFSDQLDTDFMMCSPVRNVPSPQQASTYNCNYNYAHSMQAQSFSGCSPPRFLAQIGAYNSSGGGGGGKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEEFQQGEYSSITAANNSSKVGDGSDIVGSSSECFELGNLIPSASEESSVQENEIYHHMGSMVSASLSQALQQERYHEKQQKQQVQQQQHPHSHQHHQNLMVPIPLGLEQVVEQESGLQLVHLLLACAEAVAKEEYMLARRYLQHLNRVVTPLGDSMQRVASCFTESLTARLATTSTSNNANPTPSSTFPHSNSMEILKIYQIVYQACPYIKFAHFTANQAIFEAFEGEERVHVIDLDILQGYQWPAFMQALAARSSGAPFLRITGVGPSIESVKETGRCLTELAHSLRIPFEFHPVGEQLENLKPHMFNRRVGEALAVNTVNQLHRVPGNALGNLLTMIRDQAPSIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESAQRAKVEQYIFAPEIRNIVACEGQERVERHERLEKWRKIMEGKGFKGVPLSPNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2360 670 MobiDBLite consensus disorder prediction 258 283 - -
Amo06g2360 670 MobiDBLite consensus disorder prediction 268 282 - -
Amo06g2360 670 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 668 IPR005202 -
Amo06g2360 670 ProSiteProfiles GRAS family profile. 297 669 IPR005202 -
Amo06g2360 670 MobiDBLite consensus disorder prediction 1 34 - -
Amo06g2360 670 Pfam GRAS domain family 306 669 IPR005202 -
Amo06g2360 670 PANTHER GRAS FAMILY PROTEIN RAM1 38 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2360 Amo-Chr6 83684304 83686537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2360 300 670 GRAS Transcription Factor Family AT1G66350 45.358 2.91e-101 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo06g2360 GRAS 2.5e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2360 - - gmx:100805039 959.518