LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo06g2344	ATGGAGAACAACAAAGACGCCGGCGACGAACCGCCACGTTCTCCCATGGCGAACCCCACAGAATCCGATCCCAAACTAGAAACCAAATCAGAAACCGACTCACAGCCACCGCCGAACGAGGGAGGGGAGGATGCAGAGAGCGCAGAGAAGAAGGAAGAGACCGGAGAGGATGTTATTGATGATCCTCCGCTTTCAACCCCGCTAAGCCTCGAGAAGGCGCACGAAGACATGGATCAATTCCTCGAAACACTGAAACAGAAGGAGGAAGCGTCGGTTGAGATGCCTGTTTTCCTTGACAAGTTCTTGGATCTGGTGGAGGACAAGATAGCAAGGTACGACGCGGGAGACGATAGAGCGGATGATTCGTCGTTGTTGGAAGCGGTGAGCCGGATTTCGAGCCTAATGAAAACCGTACAGACTCAGCACCAACCAGAACCGCTCATGAACCGCATCGGCTCGATCCAGCAGCGTGCAATGACGTACTTGGAGGAAGATTTCCGGTTGTTGATGGAACAATATAGAAACGCTACGGAATCAGATCCCGGCGGCCATGACCACAAGGGGAAGCACGTGGAGGAACAGCCGCAGGAGGATTCCGAGAACGCGCCGGAGGAATCCGAGTTGGATTTCCCGGGATATTCCGAGGAAACTATTTCCAGCCTGAAAGAGATTGCCGGCGAAATGGTTTATATGACCTCAAGGAGGAACGCGTTCGACGATGCTCTGCAAAAATTAGGGTTCGAGAAGTTTAGCATCGACGAGGTCCAGAAGGCGCATTGGGAGACTCTTTCGAGGGAGATGATCCCGTCTTGGATRAACACGTTCAAGCAGTGCGCCGCCGTGTACTTCCCCGGCGAGAGGAGGTTGGTGGATGAGGTGTTCGCCGATCGGCCTGAATTGGCAGCGGGGATCTTTAGCAACCTCTGTCGCGGCGTGACCGTTCGGGATGTGATCCCGAAAATGGACGAGCTCTTCTCCGAGGAGCACGTGGCGGAAGAGCTGAAGACGGAGCTGAATCTGGCCAAGTCGAGGCTTGGCGAGGCTACTATCTCCATCTTCGGCGACTTCGAGAACAATATAAAGTCTGATACCGGAAAGACGCCGGTGCCAGGTGGCGCCGTACACCCTGTGACGCGCTATGTGATGAACTACCTTAATACAAGTGGTGATTACAAGGAGACGTTGGAGCAGGTTTTCAAGGAGCATTCGAAGATCGAGCGCGCAGATTCCACCAGTAGGCCCCATGGCGAGAGTCAGGGGCAGAATGGGAAAGAGGATGAGAAGGCAGCTGCGTCGCCGTTTGCAGCGCAGGTGATGAGGGTGATGGACTTGCTGGACTCCTACCTCGACTCCAAGGCCAAGCTCTACAAGGATAGTTCTCTAACTTCCTTTTTCATGATGAACAATGGAAGGTACATTCTGCAAAAGATAAAGGGGTCAATTGAGATGGCGCAAGTGATGGGAGACAACTGGTGTCGGAAGAGATCCTCAGAGCTTCGAGCATACCACAAAAAATATATGAGAGACACATGGCACAAAGTGTTAGAATCCCTGAAACATGAGGAGCTGACGGTGAACGGCAAGGTTGATAAACCTAAACTAAAGGAAAGGTTCAAGACCTTCAACGCCTTGTTTGACGAGATCCACAGGACACAGAGCTCGTGGGTTGTGAAGGACGGGCAGCTCCAATCAGAGCTTAGMGTCTCCATCTCCGCTGTAATCATCCCCGCTTACAGGGCTTTTCTTGGAAAATACGCTCAGGTATTGGATCCTGGCCGCCAAACAGAGAAGTATATCAAGTACCAACCTGAAGATATAGAGAACTATATTGATGAGTTATTTGATGGAAAGCCTCATCAGTCTATTGCCAAAAGGAAAACATGA	1884	0.5165	MENNKDAGDEPPRSPMANPTESDPKLETKSETDSQPPPNEGGEDAESAEKKEETGEDVIDDPPLSTPLSLEKAHEDMDQFLETLKQKEEASVEMPVFLDKFLDLVEDKIARYDAGDDRADDSSLLEAVSRISSLMKTVQTQHQPEPLMNRIGSIQQRAMTYLEEDFRLLMEQYRNATESDPGGHDHKGKHVEEQPQEDSENAPEESELDFPGYSEETISSLKEIAGEMVYMTSRRNAFDDALQKLGFEKFSIDEVQKAHWETLSREMIPSWXNTFKQCAAVYFPGERRLVDEVFADRPELAAGIFSNLCRGVTVRDVIPKMDELFSEEHVAEELKTELNLAKSRLGEATISIFGDFENNIKSDTGKTPVPGGAVHPVTRYVMNYLNTSGDYKETLEQVFKEHSKIERADSTSRPHGESQGQNGKEDEKAAASPFAAQVMRVMDLLDSYLDSKAKLYKDSSLTSFFMMNNGRYILQKIKGSIEMAQVMGDNWCRKRSSELRAYHKKYMRDTWHKVLESLKHEELTVNGKVDKPKLKERFKTFNALFDEIHRTQSSWVVKDGQLQSELXVSISAVIIPAYRAFLGKYAQVLDPGRQTEKYIKYQPEDIENYIDELFDGKPHQSIAKRKT*	628

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo06g2344	627	Gene3D	Exocyst complex component Exo70	100	624	-	-
	Amo06g2344	627	Coils	Coil	331	351	-	-
	Amo06g2344	627	MobiDBLite	consensus disorder prediction	172	213	-	-
	Amo06g2344	627	MobiDBLite	consensus disorder prediction	402	431	-	-
	Amo06g2344	627	MobiDBLite	consensus disorder prediction	1	77	-	-
	Amo06g2344	627	MobiDBLite	consensus disorder prediction	402	424	-	-
	Amo06g2344	627	PANTHER	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	313	622	-	-
	Amo06g2344	627	PANTHER	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	57	314	-	-
	Amo06g2344	627	Coils	Coil	70	90	-	-
	Amo06g2344	627	SUPERFAMILY	Cullin repeat-like	112	615	IPR016159	-
	Amo06g2344	627	MobiDBLite	consensus disorder prediction	43	58	-	-
	Amo06g2344	627	MobiDBLite	consensus disorder prediction	178	197	-	-
	Amo06g2344	627	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	313	622	IPR004140	GO:0000145\|GO:0006887
	Amo06g2344	627	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	57	314	IPR004140	GO:0000145\|GO:0006887
	Amo06g2344	627	Pfam	Exo70 exocyst complex subunit	313	612	IPR046364	GO:0000145\|GO:0005546\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo06g2344	Amo-Chr6	83471299	83474331	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo06g2344	30	627	EXO70 exocyst subunit family	AT5G13990	45.214	0.0	528

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo06g2344	K07195		-	gmx:100820172	705.286