Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2321 ATGTTCATCAGAAAGTTATGCAACATAGTCGAAGACATTTTCACGGAGCGAAACGACCCGCCTATATGGAGTAGTGAGTTGGAACGACATTTCGGTGGATCGTACTCCTATGCTTGCATGAGAGCTCGACCTAGATGCCAACTTGAGTTCAGTCATCTAGAGCTTGGCTCCAGAGCAACTTTCGTAGGGATTTATGATGGCCACAATGGTCCCGAGGTGGCTTCGCATGCTTATGAGAATCTTTTTTATCATTTAATTGTCGATGAAGAAAAGATAACTCAAGCAGTAGATACCATGGAGAACCAAATTATAGCGCTTTCAAGGGAGGATATAACCCAAAAGTTTGCCACTGTTGGATCATGTTACTTGATTGTTTTAAAATACAAGGACTTACTTTATGTTAGAATTCTTGGTGACGAAAAATGCGTTCTTGGACGGGATGCGTATCTCAAGTATGATAATTGTGTAGTTCAAGCTACCGATTTAGTGCGTTTTCATATTCTAGGACCAACGAGTAGGCCTTACCTTACTGTTAAAGTGCAAATCCCAACACAGACAGGTAGACTCCTTAGCCAGCCAGCAAAATTTGTCATAATTGCTTCAAATGGCCTTTGGGACTTTTTGTTCAATGAAGAAGCGACGAAAATCGTCCAAACTCATCCGAAAACGGGGATTGCACGTATACTGATGGAGGCACAAAAGGTGGCAGCGAGAATTAATCGCTACGCATACATCAATCATCGAAACAATACAAATAATCGAAATGAGGTCCACGATGATATGACAGCCGTAGTAGCAATACCAAAGGTATCTGTGCAAGCATTCAGTGAAGCCAATCAAAATTTAAGGTTCGCAGCTGTAGATGAGTTAATGCCTTAA 879 0.4141 MFIRKLCNIVEDIFTERNDPPIWSSELERHFGGSYSYACMRARPRCQLEFSHLELGSRATFVGIYDGHNGPEVASHAYENLFYHLIVDEEKITQAVDTMENQIIALSREDITQKFATVGSCYLIVLKYKDLLYVRILGDEKCVLGRDAYLKYDNCVVQATDLVRFHILGPTSRPYLTVKVQIPTQTGRLLSQPAKFVIIASNGLWDFLFNEEATKIVQTHPKTGIARILMEAQKVAARINRYAYINHRNNTNNRNEVHDDMTAVVAIPKVSVQAFSEANQNLRFAAVDELMP* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2321 292 Coils Coil 89 109 - -
Amo06g2321 292 SMART PP2C_4 24 266 IPR001932 -
Amo06g2321 292 PANTHER ALPHABET, ISOFORM E-RELATED 17 145 - -
Amo06g2321 292 PANTHER ALPHABET, ISOFORM E-RELATED 147 268 - -
Amo06g2321 292 Pfam Protein phosphatase 2C 187 244 IPR001932 -
Amo06g2321 292 ProSiteProfiles PPM-type phosphatase domain profile. 34 268 IPR001932 -
Amo06g2321 292 CDD PP2Cc 54 265 IPR001932 -
Amo06g2321 292 Gene3D - 165 267 IPR036457 -
Amo06g2321 292 Gene3D - 33 164 IPR036457 -
Amo06g2321 292 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 17 145 - -
Amo06g2321 292 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 147 268 - -
Amo06g2321 292 SUPERFAMILY PP2C-like 49 266 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2321 Amo-Chr6 83074053 83075323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2321 15 265 PP2C-type Phosphatase Gene Family AT3G51370 28.000 2.84e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2321 K01102 - adu:107494665 175.637