Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2307 ATGGTTCATTTCACTTTTTCACGTTTTCCTTACTCCCTGCCTTCTCTCTCCGTTGAAGATGTGACGTCCTCCGCTATCACCGCCGTCGCGGCTCACGTCGCACGAGCTCCCTCCGTCGCCCTCATCGCGTTTGCTCCCTTCGTTGCCATCGTCGTACGACCTCTCTCCGCCGTGCTCTTGTCTTACGAGCTCCTTCCGCGCCGCTCTCGTCGCTGCTTCTTCTCTCCTCGCCGGAGAAGTAAACCTTCTGCAGAAAGTTTCGGCTATTGTTCATGGAAACTTGAAGCTCTCCGAGAGGTGATAATGGCATGGCAGGTTGTTGGTATTCAAGGGCATAATCCTAGTGGGCATTGCTTAGTTGCATCTAAATTGGTAGATTCTATACTACCTACCTCTGTTGCTGATGATAAGGATTTGAATCCAGCAAAGAAGCTTGCTATTGATAAAAGTCAACCAATTGATATTACTTCTAAAAAGACAGAGTTGTCCATGATTATTGCAGCAGGCCCTTTTACAACAACAGACAATTTATTTTTTGAGCCCCTTGTAGAATTTAGTGGCGAGATACCGAATTCTTTGGGAGGCCTCAAGAACCTGAATTATTTGCGGTTGAATAATAACAGCCTTACAGGACCGTGTCCTCAGTCTTTAAGCAACATAGAAGGTTTAACACTTGTAGACCTCTCCTACAATAATCTGAGTGGTTCCTTGCCAAGAATACCAGCAAGAACATTAAATTTAGTGCTTCAAACAAATCAAGAGCTTGATCATGATGAAAAGCTAAGTTTCCGACATCAGATGGGTCCACCTGTGGCCAATTCTCCACCTGGTAGGTTAGCTAATTGTTGTAATCAAGTTTTTGATTTCTCAAAATATCCTCAAGAAAAATGCAATTCTGTTACGCATACTTATTATATGTGGCATAGGGAGTCAAGAGACTACAAGTGTGGATCTGAAGCTTTATCAACATTGTACCCTGATCCTGAAAATCTGAAGCAACACTCTCCCCAAAAAGGCAAAAACGTGTTATCCTACAGCATTGACCGTTTTATGCGCTGGTGGATACCATCAATTGCTTCAATTCCGGTTCCTAGTTCCAATTGCTATACTTTCGATAATTCTAGTCCCTATGATGCCACCTTATGCAGCACTTTATTCACCTGGAGGGGGTCTATGTTCTTACTCTGGGCATTTTTATTGAGGAACAAAAAGACAAAGTTTTCTTGTGAGAAAAGTAGTGATGAAGAAGAAGAAACAGCAGCAGAAAGAGCAAGTGAAGTGAATTTTGCTGATGAGATAAGTGGAATTAACACAGGACCTCCTTCACCAACTTCATCTATTAATTATTAG 1350 0.4267 MVHFTFSRFPYSLPSLSVEDVTSSAITAVAAHVARAPSVALIAFAPFVAIVVRPLSAVLLSYELLPRRSRRCFFSPRRRSKPSAESFGYCSWKLEALREVIMAWQVVGIQGHNPSGHCLVASKLVDSILPTSVADDKDLNPAKKLAIDKSQPIDITSKKTELSMIIAAGPFTTTDNLFFEPLVEFSGEIPNSLGGLKNLNYLRLNNNSLTGPCPQSLSNIEGLTLVDLSYNNLSGSLPRIPARTLNLVLQTNQELDHDEKLSFRHQMGPPVANSPPGRLANCCNQVFDFSKYPQEKCNSVTHTYYMWHRESRDYKCGSEALSTLYPDPENLKQHSPQKGKNVLSYSIDRFMRWWIPSIASIPVPSSNCYTFDNSSPYDATLCSTLFTWRGSMFLLWAFLLRNKKTKFSCEKSSDEEEETAAERASEVNFADEISGINTGPPSPTSSINY* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2307 449 PANTHER PROTEIN NSP-INTERACTING KINASE 3 184 248 - -
Amo06g2307 449 MobiDBLite consensus disorder prediction 410 425 - -
Amo06g2307 449 Gene3D Ribonuclease Inhibitor 147 258 IPR032675 -
Amo06g2307 449 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 184 248 - -
Amo06g2307 449 MobiDBLite consensus disorder prediction 431 449 - -
Amo06g2307 449 MobiDBLite consensus disorder prediction 410 449 - -
Amo06g2307 449 SUPERFAMILY L domain-like 185 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2307 Amo-Chr6 82858661 82863446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2307 101 185 Core DNA Replication Machinery Family AT1G67630 54.023 1.37e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2307 K02321 - aip:107648605 304.293