Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2290 ATGGGCGACGGCAAGGTATCCGCGACGCTCTCTTCTCCTCCAAGCCCTCCGATTCCAAAGCTTCGGGACTACTCTCTCACTCTCAACTCGATCTTACGCTGTCACTCTCAACTCCCATCTCTCAACCCTGGAAGAGCTCAGATCCCCGCCGTCACCAGCACCGTCCTCGCTGCGCCATTAGCCTCCCCTCTGCCTCGTCTCCCCCTCGTCACTAGGGTCGCCCTCCTCGCCGATCTCCTCTGCATCGTCAGTGTCGTCTCTCTCTCTGCTCCCAACGCTAACTGCAATAGGGTTGCCATGGCAATTTCTCCATCTGGTATAAACCCGGCAGTTGGCTCAAAACTCTCTCCTGGTTCTCCAGATTATTATTTGGGGGCAGAGTTGCTGAAATTTGATTCTCTCATTGGTGAGTCAGTGCTTAAATATTTGTGGCATCATCAGGATGCCATTTTGTGCTGTTCTTTGAAGTCAGTGCCGGTGTTTATCTTTGCAAACCAGGCTGGCCTTGACAAGTTGGAAACAACTTTGGTGGCTTTACAAGACATCACATGGTGCCTTGTATTAACTCCATCTTGTGAAGGCAGAGAAAGCTAG 594 0.5152 MGDGKVSATLSSPPSPPIPKLRDYSLTLNSILRCHSQLPSLNPGRAQIPAVTSTVLAAPLASPLPRLPLVTRVALLADLLCIVSVVSLSAPNANCNRVAMAISPSGINPAVGSKLSPGSPDYYLGAELLKFDSLIGESVLKYLWHHQDAILCCSLKSVPVFIFANQAGLDKLETTLVALQDITWCLVLTPSCEGRES* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2290 197 Pfam MEKHLA domain 122 190 IPR013978 -
Amo06g2290 197 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 96 183 IPR044830 GO:0003700
Amo06g2290 197 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 96 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2290 Amo-Chr6 81804891 81806363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2290 96 197 Homeobox Transcription Factor Family AT5G60690 62.069 5.67e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2290 K09338 - adu:107466361 159.073