Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2289 ATGGCCACGCTTCTAAACCAACCGCCACCCTTTGATAGGTCACCCTTTCAAAAGCGTGGCGGTAGCTCAAAAAGCCCTCCCCTCTGCCTCGTCTCCCCCTCGTCACTAGGGTCGCCCTCCTCGCCGATCTCCTCTGCATCGTCAGTGTCGTCTCTCTCTCTGCTCCCAACGCTAACTGCAATGGCTGACGACGAACCCGTTGATCAAAAGAGATACCTCGAAGGCTCTTGCAAACCAAAGTGTGTCAAACCATTACTTGAATATCAGAAACAAACAAGAGATGCTACCATTCTTTCATTCTGTTCTTCAATTGCCTTCTTTTTTCTTCCTTCTGTGCAGAGGGTTGCCATGGCAATTTCTCCATCTGGTATAAACCCGGCAGTTGGCTCAAAACTCTCTCCTGGTTCTCCAGAGTCTCTTACACTAGCCAACTGGATCTGCTGCAGTTATAGGCAATCAGTGCCGGTGTTTATCTTTGCAAACCAGGCTGGCCTTGACAAGTTGGAAACAACTTTGGTGGCTTTACAAGACATCACATGGTGCCTTGTATTAACTCCATCTTGTGAAGGCAGAGAAAGCTAG 582 0.4863 MATLLNQPPPFDRSPFQKRGGSSKSPPLCLVSPSSLGSPSSPISSASSVSSLSLLPTLTAMADDEPVDQKRYLEGSCKPKCVKPLLEYQKQTRDATILSFCSSIAFFFLPSVQRVAMAISPSGINPAVGSKLSPGSPESLTLANWICCSYRQSVPVFIFANQAGLDKLETTLVALQDITWCLVLTPSCEGRES* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2289 193 MobiDBLite consensus disorder prediction 27 45 - -
Amo06g2289 193 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 147 179 - -
Amo06g2289 193 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 109 150 - -
Amo06g2289 193 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 147 179 IPR044830 GO:0003700
Amo06g2289 193 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 109 150 IPR044830 GO:0003700
Amo06g2289 193 Pfam MEKHLA domain 146 186 IPR013978 -
Amo06g2289 193 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2289 Amo-Chr6 81800441 81802732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2289 109 179 Homeobox Transcription Factor Family AT5G60690 51.887 7.60e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2289 K09338 - aip:107640931 117.087