Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2209 ATGGTAGTAACAATCGATCGTTCTTACACGATTACCCCCTCAGATTCCTCTTCCACTACAATAATCCCTTTGTCACACTGTGATCAAACCAAGCTTCCAAACCATGGATCCCAACTTTCTCTCTACACCACTTCTAATTCCTCTTCTTCAACGGAAAATTTCAGAGCCTCACTCAGCAAAGCCTTGAATCTCTACTACCCTTTAGCCGGTAGACTCAGATGGATCCATGGCGGTCGATTACAACTTCTCTGCAACTCAAAGGGCGTCACACTATTGGAAGCCACGTGTCACGATAATCAGACAACCTTGGACATGCTTCTCGAAAACCTTGATAACAATGTTTTGTTGGAACAGTTTTTGCCCAAGGTTGACTATAGCGTTGACCGTATTGACGACATGCCGTTGATGGCGGCACAATTCACGAGGCTTCCGGGCAACGGCGTCGTTTTGGGGATGATTATTTGTCGTGCTGTGGTTGACGGAGCGGCTCTTGGGAATTTCATGACTTCATGGTCAAAATTGGCGAGAGGTGAAGATTTGGATTCGAGTTTGGTTCCGTTTTATGATCGAGGGCTGTTGGATTCGCTTGGTGTGAGTGTGGGTCCAAGATTTGAACATGCTGAATTTCTAACACCGCCACTTTGGGAAGAACAAAAAGAAGAAGAACCACAAGAGATTGAGCTTGCTACTGTTGTGTTGAAGCTCACCAAAGGCCAAGTTGAGATGCTTAAGAAGAAAGCTTATCATGATGGGGTTAAAGATGGCTTTGGCAATGGTTCAAACTCATCAAATACACTTTCTTCAAGTAGGCCTTACACTAGTTTTGAGGTCATAAGTGGTCACTTATGGAGGTGTATTTGCAAGGTGAAGAATGAGGGTAATTGGGGCCAGAAAACAAGGGTATGTGCGTTGGTCAATTGCAGGAACAGATTTAAACCAAATCTTCCTCAAAGTTATTTTGGGAATGCAACATTTCCTACCGTGACACCAACATGTTGCTTCGATGATATTGTTCACAAGCCTCTAGGCTAYGCCGTTCRGAACGTGAGGAAAGCGATTGAGCGAATGAATGATGAGTATGTAAGGTCTGCCATTGCTTACATTGCTAATCAGAAGGACATGAATTCATTGAGGSAGAAGTTGTATAATCTTGGAGGAGGAAAATCCAGGGTGAACCCGAATATKTATATTGTGAGTTGGGCTAACTTTCCTTTTTATGAAGCGGATTTCGGGTGGGGAAAGCCGGTTTGTTTGGTTCCGGGAAGCATAAATTCGGATGGGAAGGTTTTCATTATGAACAATGGAAGTGGTGATGGCTTCATTGTTGCTACTTGCTTGCAACAATCCCTTGTGGATGATCTGAAGAAGCTCTTTTATGAGGATATAGAGGAGGTATATCCTAACTCTAAATTGTGA 1416 0.4336 MVVTIDRSYTITPSDSSSTTIIPLSHCDQTKLPNHGSQLSLYTTSNSSSSTENFRASLSKALNLYYPLAGRLRWIHGGRLQLLCNSKGVTLLEATCHDNQTTLDMLLENLDNNVLLEQFLPKVDYSVDRIDDMPLMAAQFTRLPGNGVVLGMIICRAVVDGAALGNFMTSWSKLARGEDLDSSLVPFYDRGLLDSLGVSVGPRFEHAEFLTPPLWEEQKEEEPQEIELATVVLKLTKGQVEMLKKKAYHDGVKDGFGNGSNSSNTLSSSRPYTSFEVISGHLWRCICKVKNEGNWGQKTRVCALVNCRNRFKPNLPQSYFGNATFPTVTPTCCFDDIVHKPLGYAVXNVRKAIERMNDEYVRSAIAYIANQKDMNSLRXKLYNLGGGKSRVNPNXYIVSWANFPFYEADFGWGKPVCLVPGSINSDGKVFIMNNGSGDGFIVATCLQQSLVDDLKKLFYEDIEEVYPNSKL* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2209 471 Gene3D - 1 210 IPR023213 -
Amo06g2209 471 Gene3D - 214 460 IPR023213 -
Amo06g2209 471 SUPERFAMILY CoA-dependent acyltransferases 20 188 - -
Amo06g2209 471 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 8 464 - -
Amo06g2209 471 Pfam Transferase family 2 458 - -
Amo06g2209 471 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2209 Amo-Chr6 78894331 78896636 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2209 1 460 Monolignol Biosynthesis Gene Families AT5G48930 31.897 5.69e-68 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2209 K13065 - gmx:100819383 460.685