Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2188 ATGGCTCTTTCTCGTACTCTAATAATAATCCTTGTTGCATTTTGTACCATCTTCTCAACCATAGCTGTCGAAGAATACATAGTTGGAGATGACTATGGTTGGAGAACATTATTTGATTACCAAGCTTGGGCTGCAGACAAGAATTTCTATGTTGGGGACCGGATTGTGTTCAAGTATGTTCCCGGGTGGGACAACGTGGTGAGAGTGAATCCAGATGAGTTTATAACTTGTTCAGTTTCTCCTAATGCAATAACATTGAGTAGTGGAGAAGATGAGATTATATTTGGAGGCACAGGGGCAAGATGGTACATTTCAAGTATTGGTAATCATTGTAAATTGGGACAAAAGCTTGCTATATATGTGTGGCCAGCATGGTCTCCTCCATTACCTTCTCCTGCACCATGGACTCCTATAACGCCTTCAATAGTTACGCCACCTGCACCATTGACTCCTATAATGCCTCCTTCTGAACCTCCTTATGCACCATCTGCACCATGGACTCCTATTACACCTTCAATAGCTACGCCACCTGCACCATGGACTCCTATAACGCCTTCACCTGAACCTCCTTATGCACCATGGTCAACTGAATCTCCTTATGCACCTCAAATAATACCTACCCCAATCGCACAAGCACCACGAACTCCTGGAACACCTTCATCTTCTATATCTCCTGCACCTGCACCTTCCTCCCAGCTTCATTATGCTTCATGGACTACTAATAAATTAAATATCTGA 738 0.4336 MALSRTLIIILVAFCTIFSTIAVEEYIVGDDYGWRTLFDYQAWAADKNFYVGDRIVFKYVPGWDNVVRVNPDEFITCSVSPNAITLSSGEDEIIFGGTGARWYISSIGNHCKLGQKLAIYVWPAWSPPLPSPAPWTPITPSIVTPPAPLTPIMPPSEPPYAPSAPWTPITPSIATPPAPWTPITPSPEPPYAPWSTESPYAPQIIPTPIAQAPRTPGTPSSSISPAPAPSSQLHYASWTTNKLNI* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2188 245 MobiDBLite consensus disorder prediction 214 232 - -
Amo06g2188 245 Gene3D - 23 125 IPR008972 -
Amo06g2188 245 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Amo06g2188 245 PANTHER BLUE COPPER PROTEIN 5 139 IPR039391 GO:0009055
Amo06g2188 245 MobiDBLite consensus disorder prediction 205 232 - -
Amo06g2188 245 PANTHER BLUE COPPER PROTEIN-LIKE 5 139 - -
Amo06g2188 245 SUPERFAMILY Cupredoxins 25 122 IPR008972 -
Amo06g2188 245 ProSiteProfiles Phytocyanin domain profile. 24 123 IPR003245 GO:0009055
Amo06g2188 245 CDD Phytocyanin 25 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2188 Amo-Chr6 78450066 78451703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2188 8 187 Phytocyanin Superfamily AT5G53870 30.811 6.88e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2188 - - ahf:112805743 387.111