Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2180 AAGCCCAGAGAGAGAGATGAACAAGGCCCGAAGAGAGTGAGTGTTGCTGCCATCACCATTGGAGATAAACCCAGTTGTTCTCTTGCTGCCAGAGATAATGTTGTCAATGCTCTGGCTCAATTATGTATCTCAACTGCATTAGCGTGTGTAGAGGCTGGTGTGTTTTCCTGTTATCCATCGATGTCTTATTTGCAGGAAGGTGAGAACCCTGCAGAGGAAGCCAAGAAAAGCAACCATCTTGATCCTCATGTTGAAGAGCAGTTTGGTGGTGGGAGATTGCTGGCTTGCATTGCTTCTCGACCTGATCAATGTGGCAGGGATGACGGGTATATTTTGGAAGATAAAGAGCTTGAATTTTATATGAAGAAAATCCAGAAGAAGGGAAAGGGTGCTGCCTGTATTCTCATGCTTGTATTTTGGATGGGATGGAATAGGTATTATAATGACTTTAGTTATCTACATGTAATATTTTGA 474 0.4283 KPRERDEQGPKRVSVAAITIGDKPSCSLAARDNVVNALAQLCISTALACVEAGVFSCYPSMSYLQEGENPAEEAKKSNHLDPHVEEQFGGGRLLACIASRPDQCGRDDGYILEDKELEFYMKKIQKKGKGAACILMLVFWMGWNRYYNDFSYLHVIF* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2180 157 PANTHER RIBOSOMAL PROTEIN S8E FAMILY PROTEIN 72 131 - -
Amo06g2180 157 PANTHER 40S RIBOSOMAL PROTEIN S8 72 131 IPR001047 GO:0003735|GO:0005840|GO:0006412
Amo06g2180 157 Gene3D - 23 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2180 Amo-Chr6 78311837 78328775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2180 39 121 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 48.598 3.58e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2180 K02995 - ming:122057795 112.079