Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2130 ATGGATCCTCGACCGATCACACGGTGCGGGTGTGAAGCTCGGATTAAGGTGCACGTTGATGATACTAATGAGCGATGGTTTGTTGAACAATTATGTGATAACCATAATCATCCCATGCTGGATGCGAGGTTTAGGGGTCTGATGCGGTCACACAGAGCAGTCAAGGAAGGTGATTTGCACCAAATCAATTCGATGAGGAAAGCTGGGTTGCGAGTGCCGACGATATTCTGTGCCTTTGCCAATCAGGAGTTTGTGGAGCACTTCCAACACTACCTGGAATTCATGAGAAGAAGAGAATTGGTGGCAGACTACAGGTCTGCATACGGCGAACCTGTTGTAAAAACAAAACTTGAAGCCATTGAGCAGTTCGCAGGCCAAAGCGACGGTTTATACAAGAGAGGTTTTCGAACTGTTTTGGGAGGTGCTGATGCTAGCCAGCAATGTGAGAGTTGTGTCCACCAAGAGGACGAGCGCTTGTGTTTTGTTCGAGGATGCAATGTATTGCAAGTAGAGATCATGGGCCGTGTCATGGGGTGA 537 0.4804 MDPRPITRCGCEARIKVHVDDTNERWFVEQLCDNHNHPMLDARFRGLMRSHRAVKEGDLHQINSMRKAGLRVPTIFCAFANQEFVEHFQHYLEFMRRRELVADYRSAYGEPVVKTKLEAIEQFAGQSDGLYKRGFRTVLGGADASQQCESCVHQEDERLCFVRGCNVLQVEIMGRVMG* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2130 178 Pfam FAR1 DNA-binding domain 3 40 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2130 Amo-Chr6 76855688 76857016 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo06g2130 FAR1 1.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2130 - - adu:107488784 160.614