Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2103 ATGGCAAAATTCAGAAAATCAATCACTCCTTTTCTCAACATATCCTTCTTATTCCTCCTAGTATTCCTTGTAATAAAACCTTCAAACATTCATTACAATTCCAAAAGTGCCCCAGCCATCAAGAACAGAAGATTCAACCATGCAAGGCTACTAAGTAGTGACATGAGTGTGGAAGGCTGCACAGACCTGCATAAATTCTCCGATGACGCCGCGAAATGCTACTACGTCCAAACCCACGAAGATTGCAGATCAAAGGGTTACATAAACTACCTTCAAATCTTCTATTGCAGCCTGGGAAACTCCCCTGTTCTCGGCCACACACTACTAATCATGTGGCTCTCCGTCCTCTTCTACCTGCTCGGCGACACGGCTTCCAACTACTTCTGTAACAATTTGGAAGGGTTGTCCAAAATCTTAAGACTATCACCAACCATTGCAGGGGTCACCCTTCTCTCGCTAGGGAACGGTGCCCCCGATTTCTTCGCCAGCGTCGTCTCCTTCACCAAAACAAGCGATGGTGCTGTTGGTCTCAACAGCATTCTTGGTGGTGCTTTCTTTGTCTCGAGTGCTGTTATGGGAATCATAAGCATTCTTGTGAGCACAAAAGAGGTTGCGGTTGATAAAGCAAGTTTCATTAGAGATGTTATTTTCTTCCTTTTCTCACTCTTTGTCCTCTTAATCATCATCTCCATTGGGAAACTCTCCTTGTTGGGCTCAATCTGCTATGTTTCTATATATTTTCTTTATGTTTGTGCTGTTTCTGCCACACATTTTATCTATGGAGATGATAAACAAGAAGCTGGAGAATTTGCGGTTGTGTCCTCATCGGATGAATCGCTTGAATCTGGGATTCCGTTGTTGGGTTATGTTGATGATGAAAAACCAAACCACTTAGAGAAAGTTGTTGAAGAAACCAATGATGAAGAGCAACGACCAGTTTTTGATATTTTGAAACATGCGGAGAATAGGATATTTGACTGGAATAACTTGGGGAAGTTTCTACAAATTCTAGAGTTGCCACTTTCTCTACCAAGAAGGCTTACAATTCCAGTTGTGAACGATGAGAAGTGGTCCAAGCCATATGCAGTTATATCGGTGACACTGGCACCAGTTTTGTTGGCAACAGTTTACAACACCCAAAAGGAGAACGTGAGTTCAAGGAGCAGCTTAGTTACCTATTTAACCTCTTCATTAGTTGGAATAATTTTAGGTAACATGGCATGTGTGACCACAAAGAGTTGTAGCCCACCAAGGAGATGCTTGTTCCCTTGGTTATCTGGTGGATTTGTAATGAGTGTAACATGGACTTATCTAATTGCTGAGGAGCTTGTTTCACTATTGGTCTCAATTGGGAACATAATTGGGGTTAGCCCTTCAATTTTAGGGTTAACTGTCCTAGCTTGGGGTAATTCCCTTGGTGATTTGATAGCAAATGGTGCTATGGCTATGAATGGTGGGCCAGATGGGGCCCAAATGGCTATTTCTGGATGCTATGCTGGGCCTATGTTTAATACCTTAATGGGCTTGGGCTTGCCCCTTGTTCTCTCAGCATTGAATGATTACCCTGATCCTTATGTTATTCCTAAGGATACTTCATTGTATCAAACAATACTGTTCTTGATGGGAGGGGTTCTTTGGGCCCTTGTGATTTTGCCAAAGAAGAACATGAAGCTTGATAAATCCTTGGGGGTAGGACTTGTGACTATATACCTTTGCTTCTTGTTTATAAGGATCGCCATGGCTATTGGCGACTTGGCGTAG 1761 0.4259 MAKFRKSITPFLNISFLFLLVFLVIKPSNIHYNSKSAPAIKNRRFNHARLLSSDMSVEGCTDLHKFSDDAAKCYYVQTHEDCRSKGYINYLQIFYCSLGNSPVLGHTLLIMWLSVLFYLLGDTASNYFCNNLEGLSKILRLSPTIAGVTLLSLGNGAPDFFASVVSFTKTSDGAVGLNSILGGAFFVSSAVMGIISILVSTKEVAVDKASFIRDVIFFLFSLFVLLIIISIGKLSLLGSICYVSIYFLYVCAVSATHFIYGDDKQEAGEFAVVSSSDESLESGIPLLGYVDDEKPNHLEKVVEETNDEEQRPVFDILKHAENRIFDWNNLGKFLQILELPLSLPRRLTIPVVNDEKWSKPYAVISVTLAPVLLATVYNTQKENVSSRSSLVTYLTSSLVGIILGNMACVTTKSCSPPRRCLFPWLSGGFVMSVTWTYLIAEELVSLLVSIGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAMNGGPDGAQMAISGCYAGPMFNTLMGLGLPLVLSALNDYPDPYVIPKDTSLYQTILFLMGGVLWALVILPKKNMKLDKSLGVGLVTIYLCFLFIRIAMAIGDLA* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2103 586 Gene3D - 141 272 IPR044880 -
Amo06g2103 586 Gene3D - 361 579 IPR044880 -
Amo06g2103 586 Pfam Sodium/calcium exchanger protein 111 252 IPR004837 GO:0016021|GO:0055085
Amo06g2103 586 Pfam Sodium/calcium exchanger protein 427 578 IPR004837 GO:0016021|GO:0055085
Amo06g2103 586 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 7 583 - -
Amo06g2103 586 PANTHER CATION/CALCIUM EXCHANGER 1 7 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2103 Amo-Chr6 76442638 76445202 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2103 31 585 Antiporters AT5G17860 49.644 1.34e-179 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2103 K13754 - gmx:100818583 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2784 16 123907851 123910432 Amo06g2103 06 76442638 76445202 hybridization