Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2102 ATGGGTTATTCCACCTTGTTGCTGAACGCGTCTTTCCTCATCGTCTTCTCTGTTTTCCTTGTTCTTCATGTCAACTCTCCTTCAGAACAGCTTCCTCTGAGAAAGTACCATTTTACCCTTGGTGACATTGATGAGAATGATGATTCTTGCAAGAGCTTTCACAGCCTCAGTGACAACGAAGCAAAGTGCTTGTACTTGAAATCCAATGACCCTTGTGTCACTGAGGGTTATGTTGATTATCTTTACCTTTTCTACTGCAAATTTGGGGATTTAGCTCTTTTTGGTCAAACCCTTTTGTTCCTTTGGCTATTGGTCTTGTTCTACCTTCTAGCTAACACTGCTTCTGAATACTTTTGCCCTTCCCTTGAGAGCCTCTCAAAATTGCTGAGATTGTCCCCAACAGTTGCTGGAGTAACCCTTCTTTCCCTTGGCAATGGTGCCTGTGATGTCTTTGCAACACTTGTTTCCTTCAATGGCAGTGGCACTGGAGGTATTGGATTCAACACTGTGCTTGGGGGTGCTTCCTTTGTGTCCTGCGTTGTGGTTGGGATTGTTAGCATATCGGTTAGGCATCGAGGAATTCGAGTTAAGAAGTCTGCATTGATAAGAGATGTCAGTTTTCTTCTCTTTGTGCTTGTGTGCTTGTTCGCGATCTTAATTGCCGGCGAGATCAATGTTATTGGGGCAATTAGCTTCTGTTTGATGTATGTTGTTTATGTGGTTATTGTCTACATCTCGTCGACCCGGTGGAAGGGTGACTCTAGCGACAGTCAATCGAGTAATGGCGACGATCCGTCCGTGCCCCTTATCATTGGAATGGAGAAAGGAGTAATTGGTAATGATGAAAATGGATCTCAAGAATGTAGGTTCAACTTTGAGGAGAAATTCTGCTTTAAGAAATCTCCAATATGTAGATTTTCACTTTGTGTCTTGGAGTTGCCACTTTACTTGCCAAGGAGATTGACAATTCCGGTTGTTTGTGAAGAGAGATGGTCCAAACCATATGCAATTCTGTCAGCCCTGTTATCACCATTGCTATTGTCTTCTCTCTGGACCCCGGGAAGCCTAACGGTCTATGGAACCGGATTATTAATCGGAATCATCTTAGCCGTAGCCGCATTCTTCACCACCGAGCCATCTAGTCCGCCGAAGAAGTACATGTTCCCTTGGCTTGCAGGGGGGTTTGTGATGAGTGTTACATGGAGTTACATTTCAGCTCAAGAACTGGTTGGATTGTTGGTCTCACTTGGTTACATATGTGGAATTAGTCCTTCAATTTTGGGGCTAACAGTTCTTGCTTGGGGAAATTCAATTGGAGACTTAGTGACAAATTTGACTATGGCGTTACATGGTGGGACAGAAGGTGCTCAAATTGCAATATCAGGTTGTTATGCTGGCCCTATATTCAACACTGTGATTGGATTAGGCTTATCCCTTGCAAGTTCAACTTGGTCACAGTATCCAAATTCTGTTATTATACCAAAAGATCCATATCTTTGGGAAACACTAACACTTTTGGTAATTGGATTGATTTGGGCACTTTTGGTGTTGGTAAGAAGGGATATGAAGCTTGATTCACTCTTAGGGGGAGGGCTTCTTGCCGTTTACTTCATTTCATTGTTTCTAAGGCTGATTCAGACATTAGGGACTTGCCAATTTCAGGATATATTACCAAAATGA 1680 0.4286 MGYSTLLLNASFLIVFSVFLVLHVNSPSEQLPLRKYHFTLGDIDENDDSCKSFHSLSDNEAKCLYLKSNDPCVTEGYVDYLYLFYCKFGDLALFGQTLLFLWLLVLFYLLANTASEYFCPSLESLSKLLRLSPTVAGVTLLSLGNGACDVFATLVSFNGSGTGGIGFNTVLGGASFVSCVVVGIVSISVRHRGIRVKKSALIRDVSFLLFVLVCLFAILIAGEINVIGAISFCLMYVVYVVIVYISSTRWKGDSSDSQSSNGDDPSVPLIIGMEKGVIGNDENGSQECRFNFEEKFCFKKSPICRFSLCVLELPLYLPRRLTIPVVCEERWSKPYAILSALLSPLLLSSLWTPGSLTVYGTGLLIGIILAVAAFFTTEPSSPPKKYMFPWLAGGFVMSVTWSYISAQELVGLLVSLGYICGISPSILGLTVLAWGNSIGDLVTNLTMALHGGTEGAQIAISGCYAGPIFNTVIGLGLSLASSTWSQYPNSVIIPKDPYLWETLTLLVIGLIWALLVLVRRDMKLDSLLGGGLLAVYFISLFLRLIQTLGTCQFQDILPK* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2102 559 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 2 552 - -
Amo06g2102 559 Gene3D - 131 271 IPR044880 -
Amo06g2102 559 Gene3D - 336 544 IPR044880 -
Amo06g2102 559 PANTHER CATION CALCIUM EXCHANGER 2 552 - -
Amo06g2102 559 Pfam Sodium/calcium exchanger protein 100 244 IPR004837 GO:0016021|GO:0055085
Amo06g2102 559 Pfam Sodium/calcium exchanger protein 391 543 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2102 Amo-Chr6 76382828 76385201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2102 8 552 Antiporters AT5G17850 51.510 2.03e-158 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2102 K13754 - gmx:100787016 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2782 16 123886158 123889149 Amo06g2102 06 76382828 76385201 hybridization