Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2098 ATGACTTTCAAGACACTAGAAGAAGTTGGAAAGTTCTACAAACATTATTCGGAACTTGCCGGTTTTTCTACCAAAATAAGGAACACGACTCGGGATGGAGACAATATTAAGAATCAACTAATCGTATGCACCAGAGAGGAGAGGTGGAAATCCAAAATATCTCTAACTTTGAAGACAAATCCTTCAGTCGGGTTGAACTGTCTAGCCAGGATTTATGTACACATAATGAAGGATGTTGGTTTTTGGATAATTTCCAAAGTTGTTATGAATCACTCACATCCTTGTTGTCCAGATCGGGCAGAGATGCTCAAACAACATAGGGAGCTTAGCATAGCTGTACGAGGATCGGCATATATGGATTCCAGTTTACCTGGATCATCACTTCTGAGCCGGGATGAGAAGCACAAAAAAGAGCGAGAGTATGCACTCATTTTTCAACAATTTCAACACGTGTATACCCACGAGAAGTTCAGGGAAGTTCAAGCACAATTCAGAGAAAAAGTGATCTGCATCACAAGATTAATGCATTCCACCCTAGGTTTCACAACATACGAAGTCGTAGAGCAGGTTTCTAAATCGACATTCAACAAGTTTTTGGTCACCTACGATGCAATATCACGAGAGGTAAAGTGCCAGTGCTTGCTGTTCGAGTCAAGGGGCATATTGTGTTGCCATTCCCTGAGCATTCTAAGCTTCGAGCGAGTGGATAACAACATAAAGAGTAGGCACACACACATCATGAGCAGCCAAGATGAGCCTCTACTGGAGCCGAGAAGTAAAAGATTCGACGACTTGGTGTTTCGGTCGCACAATATATGCGAATTTTGCATCATAGTCCGAGGAGTTGACCAGAATTCTGCATCGGGCGTTTGA 873 0.425 MTFKTLEEVGKFYKHYSELAGFSTKIRNTTRDGDNIKNQLIVCTREERWKSKISLTLKTNPSVGLNCLARIYVHIMKDVGFWIISKVVMNHSHPCCPDRAEMLKQHRELSIAVRGSAYMDSSLPGSSLLSRDEKHKKEREYALIFQQFQHVYTHEKFREVQAQFREKVICITRLMHSTLGFTTYEVVEQVSKSTFNKFLVTYDAISREVKCQCLLFESRGILCCHSLSILSFERVDNNIKSRHTHIMSSQDEPLLEPRSKRFDDLVFRSHNICEFCIIVRGVDQNSASGV* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2098 290 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
Amo06g2098 290 ProSiteProfiles Zinc finger SWIM-type profile. 198 234 IPR007527 GO:0008270
Amo06g2098 290 SMART 26again6 209 236 IPR006564 GO:0008270
Amo06g2098 290 PANTHER OS03G0843700 PROTEIN 143 242 - -
Amo06g2098 290 PANTHER OS03G0843700 PROTEIN 1 108 - -
Amo06g2098 290 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 143 242 IPR031052 GO:0006355
Amo06g2098 290 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 108 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2098 Amo-Chr6 76269204 76271193 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo06g2098 FAR1 3.7e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2098 - - adu:107484182 324.324