Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2068 ATGACTTCTACAGTTTCATGCGCAGATATCATAACACTAGCCACAAGAGATGCCGTGGCCTTTTCCGGTGGACCCAAATACGCCATCCCCACCGGACGGCGCGACGGCTTAGTATCCAACAACAGCGACGTTGACATACCACGAGCAAGTGCGCCGGTGCAATTTATATCACAATTTTTCGCAAACAAGGGAATGACAGTAGAGGAAATGGTGGTTCTCTTGGGTCCACATAGTGTTGGTGTTGCTCATTGTGTTTCCTTTCAGAGAATGCTTTTGAGTTTTAATGGGAAACATGATCCTACAATGGATCCTGCATTGGATTCTAAGCTTGTGAAGGTTTGTAACCCAAAGGCGGGAAGAGTTCAAGTTTCGCCTCCAAGAGCTTGCTTTGGATAG 396 0.4672 MTSTVSCADIITLATRDAVAFSGGPKYAIPTGRRDGLVSNNSDVDIPRASAPVQFISQFFANKGMTVEEMVVLLGPHSVGVAHCVSFQRMLLSFNGKHDPTMDPALDSKLVKVCNPKAGRVQVSPPRACFG* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2068 131 Gene3D - 3 46 - -
Amo06g2068 131 PANTHER PEROXIDASE 44-RELATED 3 116 - -
Amo06g2068 131 Gene3D Peroxidase, domain 2 47 119 - -
Amo06g2068 131 PRINTS Haem peroxidase superfamily signature 5 22 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g2068 131 PRINTS Haem peroxidase superfamily signature 23 35 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g2068 131 PRINTS Haem peroxidase superfamily signature 69 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g2068 131 PANTHER PEROXIDASE 25-RELATED 3 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g2068 131 ProSiteProfiles Plant heme peroxidase family profile. 1 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g2068 131 PRINTS Plant peroxidase signature 68 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g2068 131 PRINTS Plant peroxidase signature 23 38 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g2068 131 PRINTS Plant peroxidase signature 4 14 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g2068 131 Pfam Peroxidase 3 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g2068 131 SUPERFAMILY Heme-dependent peroxidases 3 115 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2068 Amo-Chr6 75347990 75348477 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2068 3 127 Peroxidase AT5G17820 51.938 3.13e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2068 K00430 - gmx:100777946 150.984