LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo06g2041	ATGGTTTTCACGCCCGAGGATCAGATTCTCGTGGGTTTGGCCGTTGCTGTTGTGGCCATTGGTGTTGGTGCTTTCTACATCTACTCATCCAAGAAGCCCAAAGCTTGCTTGGACCCAGAGAAGTTCAAGGAGTTCAAGCTTGTCAAGCGTCTACAACTGAGCCATAATGTGGCAAAGTTCACATTTGCGCTTCCAACACCGACTTCTGTTTTGGGTCTTCCAATTGGGCAACACATAAGTTGCAGGGGTAAGGATAGCCAGGGTGAGGAGGTTATCAAACCATATACCCCTACTACTTTGGATTCAGATGTTGGACATTTTGAACTTGTTATTAAGATGTACCCACAAGGTAGGATGTCACACCATTTCCGTGAGATGAAGGTTGGTGACTATCTTGCTGTAAAAGGACCCAAGGGACGTTTCAAGTACCAACCTGGCGAAGTTAGGGCCTTTGGGATGCTTGCTGGAGGATCTGGAATCACTCCAATGTTCCAGGTTGCTAGGGCTATTTTAGAAAACCCACAAGACAAGACTAAGGTTCACCTTATCTATGCCAATGTGACATATGAGGACATTCTTTTAAAGGATGAACTTGATGGCCTTGTTGCTAACCATCCAGGTCAGTTCAAGGTGTACTATGTCTTAAATCAGCCTCCTGAATCATGGAGCGGTGGTGTCGGATTCGTCTCAAAAGAAATGATTCAAGCTCATTGCCCTTCTCCAGCAACTGATATTAAGATCTTAAGATGTGGGCCACCACCAATGAACAAGGCCATGGCTGGTCACCTTGAGGCACTTGGATATGCTCCTGAGATGCAGTTCCAGTTCTGA	831	0.4597	MVFTPEDQILVGLAVAVVAIGVGAFYIYSSKKPKACLDPEKFKEFKLVKRLQLSHNVAKFTFALPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMKVGDYLAVKGPKGRFKYQPGEVRAFGMLAGGSGITPMFQVARAILENPQDKTKVHLIYANVTYEDILLKDELDGLVANHPGQFKVYYVLNQPPESWSGGVGFVSKEMIQAHCPSPATDIKILRCGPPPMNKAMAGHLEALGYAPEMQFQF*	277

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo06g2041	276	Gene3D	-	135	276	IPR039261	-
	Amo06g2041	276	Gene3D	Translation factors	34	134	-	-
	Amo06g2041	276	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	132	272	IPR039261	-
	Amo06g2041	276	CDD	cyt_b5_reduct_like	45	276	-	-
	Amo06g2041	276	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	40	144	IPR017927	GO:0016491
	Amo06g2041	276	PRINTS	Cytochrome B5 reductase signature	71	82	-	-
	Amo06g2041	276	PRINTS	Cytochrome B5 reductase signature	93	100	-	-
	Amo06g2041	276	PRINTS	Cytochrome B5 reductase signature	129	143	-	-
	Amo06g2041	276	PRINTS	Cytochrome B5 reductase signature	152	171	-	-
	Amo06g2041	276	PRINTS	Cytochrome B5 reductase signature	190	201	-	-
	Amo06g2041	276	PRINTS	Cytochrome B5 reductase signature	246	254	-	-
	Amo06g2041	276	SUPERFAMILY	Riboflavin synthase domain-like	35	145	IPR017938	-
	Amo06g2041	276	Pfam	Oxidoreductase FAD-binding domain	45	143	IPR008333	-
	Amo06g2041	276	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	152	171	IPR001709	GO:0016491
	Amo06g2041	276	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	190	201	IPR001709	GO:0016491
	Amo06g2041	276	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	246	254	IPR001709	GO:0016491
	Amo06g2041	276	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	4	276	IPR001834	GO:0016491
	Amo06g2041	276	Pfam	Oxidoreductase NAD-binding domain	153	259	IPR001433	GO:0016491
	Amo06g2041	276	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	4	276	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo06g2041	Amo-Chr6	74355020	74359715	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo06g2041	25	276	NADPH P450 reductases	AT5G17770	84.921	2.47e-166	460

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo06g2041	K00326		-	gmx:100816447	491.886