Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2027 ATGAGTTGGATTCAGCCACTACTGCGTCGTTCCAGGTCCGCGACATTCGCCGCCGTGTGGGTGGCTATCGACGCCGAAGCCACCTTTGATCTGAGCCATGGAGAAGGAAGTTCTGATTTCTCCGTCCAATGGACTGATGGATGGAGCACGGACTCAACAGATGATGATGAAGGAAGTGCTGCACGGTCACTAGAGACAGAGGAAGTTCAATCAGCAGCAGGGGATAGAGAAGATGGTTCAGTGGCTGGTGATGAGGGTTCCATGCCAGTACCAACTGGAATACACGTTGCGGCTGACACAGAATATGGTGACGAAGAATTGGGATCAGCGGTTTTAACTGCCGCCGCATTGGAATCAGCTGAGTATAATAGTGTGGAAGAGGCGTACAAAGCATATGTGGCTTTTGCGAAGGCAACTGGATTCGCTGTACGAAAGGGTGATTCTGTGAAAAATGAGGAAGGGAATATCGTGCAGAAGTTCTTTTATTGCAATCGACAAGGTTTGCGTGAGATGAAGCACTATGAGAGGGTCGATAGGAAGAGGGCTCATAAAGCAGAGACAAGAACCAATTGTTATGCCAAGTATGTTGTATACTTGGACATGAGTTCTAGAAAGTGGAGGACGAAAACGTTTATTGTGGATCATAATCACGATTTGGCCCCACCGGATTTCACCAACGTAATGGCGCCGCATCGGAAGCTGACTGATGGAGACAAAGCTCACATACATAGCATGCATGAGGCTGGATTCCAGACAACTCAAATCATGGGTTGTACACAAGGAAAATATTCTTCGAGGTAA 801 0.4769 MSWIQPLLRRSRSATFAAVWVAIDAEATFDLSHGEGSSDFSVQWTDGWSTDSTDDDEGSAARSLETEEVQSAAGDREDGSVAGDEGSMPVPTGIHVAADTEYGDEELGSAVLTAAALESAEYNSVEEAYKAYVAFAKATGFAVRKGDSVKNEEGNIVQKFFYCNRQGLREMKHYERVDRKRAHKAETRTNCYAKYVVYLDMSSRKWRTKTFIVDHNHDLAPPDFTNVMAPHRKLTDGDKAHIHSMHEAGFQTTQIMGCTQGKYSSR* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2027 266 MobiDBLite consensus disorder prediction 34 49 - -
Amo06g2027 266 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 120 242 - -
Amo06g2027 266 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 120 242 - -
Amo06g2027 266 MobiDBLite consensus disorder prediction 34 93 - -
Amo06g2027 266 MobiDBLite consensus disorder prediction 55 82 - -
Amo06g2027 266 Pfam FAR1 DNA-binding domain 132 220 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2027 Amo-Chr6 73731542 73735285 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo06g2027 FAR1 3.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2027 - - adu:107470907 436.802