Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2014 GTAACCTCGTGTAAGCTATGGCGGCAAGTGGGAGAATCTTTCAAACCTCCTAAGACATGTACCACAGTTTCATGGACTTTCCCTGGGTTTTATGAGAAGTTAGAGTCTGCTCATGTTCAGTTTTCTAATTCTAGTGATGCTCAGACTTTACTTGAAAAGGAAGAAGAAAATACTAATTCTAATATCCTTCCTACAAGTGTTGATAGAACTGAAGAATCGCCTTCAGCTCAAGCTCTGATAAACGATGCTGCAAAAGAATGGAACTTACCGGCAAGATATCCTACGGAAATGAAGAGAGAAAAGAGGAAAGCCAAGAGCAGACCATATTGGATACAATTAGTATGTTGCTCATCAGTGGATCTTCAAATAAGGCAAAAAATTGCCATATGA 390 0.3923 VTSCKLWRQVGESFKPPKTCTTVSWTFPGFYEKLESAHVQFSNSSDAQTLLEKEEENTNSNILPTSVDRTEESPSAQALINDAAKEWNLPARYPTEMKREKRKAKSRPYWIQLVCCSSVDLQIRQKIAI* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2014 129 MobiDBLite consensus disorder prediction 45 71 - -
Amo06g2014 129 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 54 119 - -
Amo06g2014 129 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 54 119 - -
Amo06g2014 129 SUPERFAMILY ARID-like 1 34 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2014 Amo-Chr6 73126150 73127584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2014 1 33 ARID Transcription Factor Family AT1G76510 84.848 1.52e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2014 - - aip:107622719 178.333