Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2005 ATGATGGTGGATACGGGTTCTGTGTCAAGAAGTGTTGGTTCCCTTGTGAATATGATGCCAGAAAAAGATGATGATGGCCGGTTTGCAAGTAGAGGGTGGAAAAGTGAGGATGGAAGGCTTAGCCGTGGGTATTCAAGCTTCAGATGGAAGAGAGTAACGATGGAGGATTTTTATGATATTAAAATATTGAAGATTGGTGGTCATTCAGTATGCTTATTTGGAATATTTGATGGTCATGGTAGTTCTCGTGCTGCAGATGAAACGTATCAATTTCTGGATTCTGAAAAAGACACTTTTTGGGATGATGGCTCTACTGCTTCAACTGCTGTTTTGGTTGATAACCATTTCTATGTTGCTAATGTTGGAAATTCTGGGACTATAATATTGGCTGGTAAAGCAATTGCTCTCTCAGGATCATAA 420 0.3976 MMVDTGSVSRSVGSLVNMMPEKDDDGRFASRGWKSEDGRLSRGYSSFRWKRVTMEDFYDIKILKIGGHSVCLFGIFDGHGSSRAADETYQFLDSEKDTFWDDGSTASTAVLVDNHFYVANVGNSGTIILAGKAIALSGS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2005 139 Gene3D - 33 89 IPR036457 -
Amo06g2005 139 MobiDBLite consensus disorder prediction 1 30 - -
Amo06g2005 139 PANTHER ALPHABET, ISOFORM E-RELATED 9 86 - -
Amo06g2005 139 PANTHER ALPHABET, ISOFORM E-RELATED 89 137 - -
Amo06g2005 139 Pfam Protein phosphatase 2C 84 132 IPR001932 -
Amo06g2005 139 Gene3D - 90 138 IPR036457 -
Amo06g2005 139 SUPERFAMILY PP2C-like 36 131 IPR036457 -
Amo06g2005 139 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 9 86 - -
Amo06g2005 139 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 89 137 - -
Amo06g2005 139 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Amo06g2005 139 ProSiteProfiles PPM-type phosphatase domain profile. 41 139 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2005 Amo-Chr6 72110096 72110591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2005 1 137 PP2C-type Phosphatase Gene Family AT5G53140 55.952 1.28e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2005 K17506 - gmx:100805795 206.068