Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1960 ATGCAGACCAGCTATGTTGTGGATGAAAAATTTGCCCCAAAGGTGGGAATGATTTTCAAGATACTAGAAGAAGTTGGGAAGTTCTACAAATATTATTCCAAACTTGCTGGTTTTTCTACGAAAATAAGGAACACGACTCGAGACAGAGACAAGATTAAGAATCAGCTAATTGTATGCAACAGAGAGGGGGACAAACCACTTTGCCGGGTTAAACTGTCCAGCCAAGATTTACGTACATATAACGAAGGACGTCAGTCTCTGGACAATTTCCAAAGTTGTTTTGAATCACTCACATCCCTGTTGTCCAGACCGGGCAGAGATGCTCAAACAACACAGGGAGCTAAGCATGTCGGGATGAGAAGCACACAAAGGAGCGAGAACATGCACACATTTTTCAATAAATTCATCACACGCAACAGCTCCCTGAGACAATTCGTGAAACAATACGACAATTGCCTAGCAAGCAGAGAGCAAAGAGAGAGAGAATTCAACGCTGCAGATTTTCACACCGTGATACTATGTGCAACAAAATCAGCAATAGAGGCCTAG 549 0.4262 MQTSYVVDEKFAPKVGMIFKILEEVGKFYKYYSKLAGFSTKIRNTTRDRDKIKNQLIVCNREGDKPLCRVKLSSQDLRTYNEGRQSLDNFQSCFESLTSLLSRPGRDAQTTQGAKHVGMRSTQRSENMHTFFNKFITRNSSLRQFVKQYDNCLASREQREREFNAADFHTVILCATKSAIEA* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1960 182 PANTHER OS03G0843700 PROTEIN 8 80 - -
Amo06g1960 182 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 80 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1960 Amo-Chr6 70791353 70792931 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo06g1960 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1960 - - aip:107612320 121.709