Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1920 ATGAAAATTTGTCCTACTAAAATAAGTAAGCTATATGGATTAGACAACTTCATAGTTTCATATTCTAAACAAAACCATGAAAAGGTAATGATATTTGAAAATCTGAATCAGGCATACGTAATTTCTCGCCTCTGTTTCATCCTTTCGTCGCCTACACTGTCACTGTGCAATTCTCTTCTCGCATGCGTCATCATCTTCTCTGCAGTCGTCTTCTCACCGGAGCAGAACAAGCTTAAGCTCTACAAGAGTAAGCAAAGGTGCACCCGAAAAGTTCCCGATGGAAGGAAAGAAAGTGCTGGAGGCCCATGGAAGCTTATTGGCCTTATGCCCCTCTTTGACCCACCTAGGCATGATAGTGCCGAAACAATACGAAGGGCACTAAATCTCGGAGTAAATGTCAAAATGATTACAGGTGATCAACTAGCTATAGGAAAGGAAGCAGGACGATGCTTGGGAATAGGTACCAATATGTACCCTTCATCAGCTTTATTTGAACAGGACAAGGATGAATTCATTGCTGCCTTGCCTATTGATGAACTAATCGAAAAATATGTCTCGATACTATCCCGAGGACTTCATGTGTGCTCGAATAAGTATTAA 600 0.4117 MKICPTKISKLYGLDNFIVSYSKQNHEKVMIFENLNQAYVISRLCFILSSPTLSLCNSLLACVIIFSAVVFSPEQNKLKLYKSKQRCTRKVPDGRKESAGGPWKLIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKEAGRCLGIGTNMYPSSALFEQDKDEFIAALPIDELIEKYVSILSRGLHVCSNKY* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1920 199 Gene3D - 113 184 IPR023214 -
Amo06g1920 199 PRINTS P-type cation-transporting ATPase superfamily signature 107 118 - -
Amo06g1920 199 PRINTS P-type cation-transporting ATPase superfamily signature 129 139 - -
Amo06g1920 199 PANTHER PLASMA MEMBRANE ATPASE 89 183 - -
Amo06g1920 199 SUPERFAMILY HAD-like 104 165 IPR036412 -
Amo06g1920 199 Gene3D - 89 112 IPR023299 GO:0000166
Amo06g1920 199 PANTHER CALCIUM-TRANSPORTING ATPASE 89 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1920 Amo-Chr6 69787879 69790067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1920 89 183 Primary Pumps ATPases AT3G47950 82.105 2.09e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1920 K01535 - ini:109191140 172.94