Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1919 GAATTAATTGTTAGTAACCAAGAAAGGAAACATATCACATCTCATACTCTTGAAAAAGATACCCTTATAGGTGATCAGCTTGCAATTACTAAGGAAACAGGAAGGTGTCTTGGAATGGGCTCTAACATACAATTTTGCTTCTATCCCGTTGATGATCTTATAGAGAATGCAGATGGTTTTGCTGGTGTCTTTTCTAGTAAGTGTAATAGCAATCACAGAAAAGCTCTAATCCAAATTCTTGTTTATTTTTTGATAATATATGTTCCCTCAGAGCACAAATATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTAATGGAGTGAATGATGCACCAGCTTTGAAAATAGCCGACATAGGTATCGCTGTAGCAGATGCCACAGATGCTGCAAGAAGTGCCTCTGACATAGTTCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACTAGCTGTGCAATTTTCCAAAGAAGGAAAAACTACACAGTAATCCCCTAA 522 0.3793 ELIVSNQERKHITSHTLEKDTLIGDQLAITKETGRCLGMGSNIQFCFYPVDDLIENADGFAGVFSSKCNSNHRKALIQILVYFLIIYVPSEHKYEIVKRLQARKHICGMTGNGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSCAIFQRRKNYTVIP* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1919 173 PANTHER PLASMA MEMBRANE ATPASE 20 66 - -
Amo06g1919 173 PRINTS H+-transporting ATPase (proton pump) signature 141 166 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo06g1919 173 PRINTS H+-transporting ATPase (proton pump) signature 82 98 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo06g1919 173 PRINTS H+-transporting ATPase (proton pump) signature 110 126 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo06g1919 173 SUPERFAMILY HAD-like 82 156 IPR036412 -
Amo06g1919 173 Pfam haloacid dehalogenase-like hydrolase 87 144 - -
Amo06g1919 173 PANTHER CALCIUM-TRANSPORTING ATPASE 20 66 - -
Amo06g1919 173 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 90 170 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo06g1919 173 Gene3D - 148 171 - -
Amo06g1919 173 Gene3D - 90 147 IPR023214 -
Amo06g1919 173 PANTHER PLASMA MEMBRANE ATPASE 89 171 - -
Amo06g1919 173 PANTHER CALCIUM-TRANSPORTING ATPASE 89 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1919 Amo-Chr6 69784231 69784787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1919 22 171 Primary Pumps ATPases AT5G62670 65.031 2.67e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1919 K01535 - ahf:112742714 189.889