Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1899 ATGTGCATAGGAGTAGCTGTCGGGGCTTACATTCTTACCTTATTTGCTATGAAGTATAGACAACGTGTACTTGGTTTGATACTTGTTTCACCTCTATGCAAAGAACCATCTTGGACTGAGTGGTTGTGCAACAAGGTCATGTCAAATTTACTCTATTTTTGTGGCATGTGCGGGGTGGCAAAGGAAATGTTGCTGAAGTGGTACTATAGCAAGGACATTCGAAGTGGTGCTCAATTCCCAGAGTCAGATATAGTTAAAGCTTGCCGAAGGGTTAGTGAATATTTTTTGTTGTTGTACAACAACTCTATTATTTCTGCTTCATTAGTGCTTCTGATCACTCTTGCTGGAGAGAGTGAAAGCAATCTGAGGAAAGCATTTGAAGAGGCTGAAAAGAATGCACCATCCATCATCTTCATTGATGAAATTGATTCTATTGCACCCAAGAGGGAGAAGACACATGGTGAAGTTGAAAGGAGGATTGTTTCACAGCTTTTGACTCTTATAGATGGATTGAAATCTCGTGCTCATGTTATCGTTATTGGAGCTACCAATCACCCAAACAGCATTGACCCAGCATTGAGAAGGTTCGGTAGATTTTATAGGAAAATTGATATTGGTGTTCCTGATGAAGTTGGTCGACTTGAAGTTCTTCGTTGGACATGCCATGTTGTGGCTCTGGTTGTAGTAGCGTTGAAAAGCGTAGTCTATTCTGAAAAAATGAAAGCTGAAAATCGTAGCCTTTGGTTCTGGACAGCATCACTTGAAAAGCGTAGCCTATTCCCAAACGTCAAAAGCGTAGCCCTTGGTGCAGAAAAGCGTAGCCTTTGA 828 0.413 MCIGVAVGAYILTLFAMKYRQRVLGLILVSPLCKEPSWTEWLCNKVMSNLLYFCGMCGVAKEMLLKWYYSKDIRSGAQFPESDIVKACRRVSEYFLLLYNNSIISASLVLLITLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLIDGLKSRAHVIVIGATNHPNSIDPALRRFGRFYRKIDIGVPDEVGRLEVLRWTCHVVALVVVALKSVVYSEKMKAENRSLWFWTASLEKRSLFPNVKSVALGAEKRSL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1899 275 SMART AAA_5 47 209 IPR003593 -
Amo06g1899 275 Pfam ATPase family associated with various cellular activities (AAA) 103 206 IPR003959 GO:0005524|GO:0016887
Amo06g1899 275 Gene3D - 111 207 IPR027417 -
Amo06g1899 275 Gene3D alpha/beta hydrolase 1 104 IPR029058 -
Amo06g1899 275 Gene3D - 208 219 - -
Amo06g1899 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 224 IPR027417 -
Amo06g1899 275 Pfam Ndr family 1 90 IPR004142 -
Amo06g1899 275 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG E 111 222 - -
Amo06g1899 275 SUPERFAMILY alpha/beta-Hydrolases 3 75 IPR029058 -
Amo06g1899 275 ProSitePatterns AAA-protein family signature. 177 195 IPR003960 GO:0005524|GO:0016887
Amo06g1899 275 PANTHER AAA-FAMILY ATPASE 111 222 - -
Amo06g1899 275 CDD AAA 40 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1899 Amo-Chr6 68660784 68662596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1899 116 218 Calmodulin-binding Proteins AT3G56690 50.476 1.09e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1899 K13525 - adu:107491015 409.838