Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1894 ATGGATTCTGATTCTGTGTTGGCATTGCCTGAGAGCAATGGATTCAAAACAAGGGACAGTCATGATTTTGAGGAAGACTTTGTAGAGAAAGATCCTACCGGCCGCTATCTTAGATACAATGAAATGTTGGGCAAGGGTGCTTTCAAGACTGTTTATAGGGGCTTTGATGAAGTTGACGGATTAGAAGTTGCTTGGAACCAAGTCAGGATTGATGAACTCCTGGGATCTGCAGATGACGTTGCRAAGTTGTACTCCGAAGTAAACCTATTGAAGTCTGTGAACCACGAAAACATCATTAAGTTCTATAATTCTTGGATTGATGATAAGAAGAAAACTGTTAACATTATTACTGAGCTCTTCACATCTGGAAACCTAAGACAATACCGGAAGAAGCATAGATATGTTGACATGAAAGCCATAAAAGGTTGGGCTCGACAAATTCTTCAAGGTCTGGTATATCTTCACGGTCACAAGCCGCCTATTATTCACAGAGACTTGAAATGTGAYAACATCTTTGTAAATGGGAACCATGGAGAAGTCAAGATCGGAGATCTCGGTTTGGCAACTGTCATGCAGCAACCAACTGCTCGAAGTGTTATTGGGACWCCCGAGTTTATGGCTCCAGAACTATATGAAGAGGAATACAATGAACTCGTGGATGTCTATTCTTTTGGGATGTGCATGTTGGAAATGGTTACTTTTGAGTACCCRTATAGCGAATGCAAGAATCCAGCTCAAATTTACAAGAAAGTTACCTCTGGCATCAAACCGAATTCCCTTAACAGGGTGAGTGATCCCCAAATTAAGGAGTTTATCAACAAATGTCTTGTTCCTGCATCTGAGAGGTTGTCTGCAGAGGAGCTTCTTARAGAYCCATTTCTGCAAGTCGAGTGTTCCAAGGATCCAATCCTTAATCCCTTAAACTCACCTAMTAAATCTCCAAAGGCTATAGATARGCCGAAATCTGGTCCTTTRTCTATAGACTTCGAGGCTGACTCCAAACATGTGTCTGTGSTTACCTGTGCTGAAAACAGCCATGGAAGTTCACATTGTCCACTTCTGGAAGTTCGGCGTACATATAAAAACAATGAGTTTAAATTGAAAGGGACCAAAAATGATGATATCACAGTGTCATTAATCTTGCGTATTGCTGATTCTTGCGGTGATTATATGCTCTTTCCATTTTTCTTTTTCTTTTTTCTTTTTCTTTTTCACATGGGAAAGATACCAAAGATGTAG 1239 0.3995 MDSDSVLALPESNGFKTRDSHDFEEDFVEKDPTGRYLRYNEMLGKGAFKTVYRGFDEVDGLEVAWNQVRIDELLGSADDVAKLYSEVNLLKSVNHENIIKFYNSWIDDKKKTVNIITELFTSGNLRQYRKKHRYVDMKAIKGWARQILQGLVYLHGHKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLATVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYSECKNPAQIYKKVTSGIKPNSLNRVSDPQIKEFINKCLVPASERLSAEELLXDPFLQVECSKDPILNPLNSPXKSPKAIDXPKSGPLSIDFEADSKHVSVXTCAENSHGSSHCPLLEVRRTYKNNEFKLKGTKNDDITVSLILRIADSCGDYMLFPFFFFFFLFLFHMGKIPKM* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1894 412 Gene3D Transferase(Phosphotransferase) domain 1 120 300 - -
Amo06g1894 412 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 398 - -
Amo06g1894 412 SMART serkin_6 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1894 412 CDD STKc_WNK 35 294 - -
Amo06g1894 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Amo06g1894 412 Gene3D Phosphorylase Kinase; domain 1 20 118 - -
Amo06g1894 412 Pfam Protein kinase domain 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1894 412 ProSiteProfiles Protein kinase domain profile. 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1894 412 PANTHER KINASE DOMAIN PROTEIN 5 398 - -
Amo06g1894 412 SUPERFAMILY Protein kinase-like (PK-like) 31 295 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1894 Amo-Chr6 68626977 68629008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1894 24 397 MAP Kinase Kinase Kinase AT1G64630 60.743 2.01e-156 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo06g1894 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1894 K08867 - gmx:100809602 613.609