Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1882 ATGTGCATAGGAGTAGCTGTCGGGGCTTACATTCTTACCTTATTTGCTATGAAGTATAGACAACGTGTACTTGGTTTGATACTTGTTTCACCTCTATGCAAAGAACCATCTTGGACTGAGTGGTTGTGCAACAAGGTCATGTCAAATTTACTCTATTTTTGTGGCATGTGCGGGGTGGCAAAGGAAATGTTGCTGAAGTGGTACTATAGCAAGGACATTCGAAGTGGTGCTCAATTCCCAGAGTCAGATATAGTTAAAGCTTGCCGAAGGGTTAGTGAATATTTTTTGTTGTTGTACAACAACTCTATTATTTCTGCTTCATTAGTGCTTCTGATCACTCTTGCTGGAGAGAGTGAAAGCAATCTGAGGAAAGCATTTGAAGAGGCTGAAAAGAATGCACCATCCATCATCTTCATTGATGAAATTGATTCTATTGCACCCAAGAGGGAGAAGACACATGGTGAAGTTGAAAGGAGGATTGTTTCACAGCTTTTGACTCTTATAGATGGATTGAAATCTCGTGCTCATGTTATCGTTATTGGAGCTACCAATCRCCCAAACAGCATTGACCCARCATTGAGAAGGTTCGGTAGATTTKATAGGRAAATTGATATTGGTGTTCYTGATGAAGTTGGYCGACTTGAAGTTCTTCGTTGGACATGCCATGTTGTGGCTCTGGTTGTAGTAGCGTTGAAAAGCGTAGTCTATTCTGAAAAAATGAAAGCTGAAAATCGTAGCCTTTGGTTCTGGACAGCATCACTTGAAAAGCGTAGCCTATTCCCAAACGTCAAAAGCGTAGCCCTTGGTGCAGAAAAGCGTAGCCTTTGA 828 0.4106 MCIGVAVGAYILTLFAMKYRQRVLGLILVSPLCKEPSWTEWLCNKVMSNLLYFCGMCGVAKEMLLKWYYSKDIRSGAQFPESDIVKACRRVSEYFLLLYNNSIISASLVLLITLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLIDGLKSRAHVIVIGATNXPNSIDPXLRRFGRFXRXIDIGVXDEVGRLEVLRWTCHVVALVVVALKSVVYSEKMKAENRSLWFWTASLEKRSLFPNVKSVALGAEKRSL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1882 275 Pfam Ndr family 1 90 IPR004142 -
Amo06g1882 275 SUPERFAMILY alpha/beta-Hydrolases 3 71 IPR029058 -
Amo06g1882 275 Pfam ATPase family associated with various cellular activities (AAA) 103 206 IPR003959 GO:0005524|GO:0016887
Amo06g1882 275 PANTHER AAA-FAMILY ATPASE 111 222 - -
Amo06g1882 275 Gene3D - 208 222 - -
Amo06g1882 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 224 IPR027417 -
Amo06g1882 275 SMART AAA_5 47 209 IPR003593 -
Amo06g1882 275 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG E 111 222 - -
Amo06g1882 275 CDD AAA 40 191 - -
Amo06g1882 275 Gene3D - 113 207 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1882 Amo-Chr6 68529505 68531317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1882 116 218 Calmodulin-binding Proteins AT3G56690 44.660 4.69e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1882 K13525 - adu:107491015 397.897