Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1851 ATGGAAGTAAACAACAACAACAATGGTGGATGTTGTTGTGGAAGTTTTTTTCAGAGGTGCAAGCCTTACATAGCAATGATATCTCTGCAATTTGGGTATGCCGGAATGAACATAATCACAAAGGTTTCTCTCAACCGCGGCATGAGCCACTATGTTCTTGTTGTCTATAGACATGCCTTTGCTACTGCTGCTATTGCTCCCTTTGCTCTTGTTCTTGAGAGGAAAGTGAGGCCTAAGATCACATTCCTTATGTTCATGCAAATGTTTGTGTTGGGTCTTCTTGGGCCTGTGATTGATCAGAACTTATACTACATGGGTTTGAAATTTACATCCCCAACATACTCGTGTGCTCTAAGCAACATGCTCCCTGCAATGACGTTTGTGATGGCAGTTATTTTCAGGATGGAGAAGTTGGACATGAGAAAAGTGAGGTGCCAAGCTAAGGTGATTGGAACAGTGGTAACAGTAGTTGGGGCAATGTTAATGACATTGTACAAAGGCCAAGTCATTAACTTCTTCTGGTCTCATTACATGCACCACCCAAGAAACTATGTACCTGATAACACCACCACTAACTCTGGTGAAACCGATTGGGTCAAGGGTTCCATTCTTCTCATCTTTGCTACCCTTGCTTGGGCTTCCTTCTTCATCCTTCAGGCAGTGACATTAAGAAAATACCCAGCTCAGCTCTCACTAACTGCCATAGTGTGCTTCTTGGGAACACTGCAATCAATTGCAGTAACCTTTGTGATGGAGCACAGTCCAAATGTTTGGACCATTGGCTGGGACATGAACTTGCTAGCTGCAGCCTATGCTGGGATAGTGTCATCAGGTATTGCATACTATGTTCAAGGGATTGTGATGCAAAGAAGAGGACCAGTTTTTGTCACTGCTTTCAGCCCTTTGATGATGATCATTGTTGCTGTTATGGGATCTTTCATCCTTGCTGAAAACATATACCTTGGAGGTGTAATTGGAGCAATTCTTATAGTAGTGGGACTCTACTCGGTTCTATGGGGAAAATACAAGGAGCACAAAGAGAAAGAAGCAGAAAATATAATCACTGATGAACCAATTAAGTGCTGTGGTAACCAAATTGCAAGGTTGGAAACTGTGATTGAAGATTCAGAATCAAATGACATTGAGATGCAAAAGGGTGATGATAATAATAATAACGAAGCTTGCAACGAACTAAGCGTGACAATTATTAGTAACAATAATAATAATAATGATAATGATGTTACAAAAGCTTGA 1254 0.4107 MEVNNNNNGGCCCGSFFQRCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQMFVLGLLGPVIDQNLYYMGLKFTSPTYSCALSNMLPAMTFVMAVIFRMEKLDMRKVRCQAKVIGTVVTVVGAMLMTLYKGQVINFFWSHYMHHPRNYVPDNTTTNSGETDWVKGSILLIFATLAWASFFILQAVTLRKYPAQLSLTAIVCFLGTLQSIAVTFVMEHSPNVWTIGWDMNLLAAAYAGIVSSGIAYYVQGIVMQRRGPVFVTAFSPLMMIIVAVMGSFILAENIYLGGVIGAILIVVGLYSVLWGKYKEHKEKEAENIITDEPIKCCGNQIARLETVIEDSESNDIEMQKGDDNNNNEACNELSVTIISNNNNNNDNDVTKA* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1851 417 Pfam EamA-like transporter family 200 338 IPR000620 GO:0016020|GO:0016021
Amo06g1851 417 Pfam EamA-like transporter family 23 163 IPR000620 GO:0016020|GO:0016021
Amo06g1851 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Amo06g1851 417 PANTHER WAT1-RELATED PROTEIN 16 370 IPR030184 GO:0016021|GO:0022857
Amo06g1851 417 PANTHER WAT1-RELATED PROTEIN 16 370 - -
Amo06g1851 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1851 Amo-Chr6 67214468 67217093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1851 13 391 Nodulin-like Gene Family AT5G07050 64.156 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1851 - - gmx:100811617 636.336