Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1848 ATGGCTTTTCTTACTACGATCATACCGCTCTCCCTCATAGCACTTCTTTTCTACAAACTCTACTTCAGGTTAAGGTTTAAGCTCCCACCGGGCCCACGTCCGTGGCCAGTCGTCGGAAACCTCTACGACATAAAGCCCGTGAGGTTCCGATGCTTCGCGGAGTGGGCCCAGTCCTACGGCCCAATTATCTCGGTGTGGTTTGGATCGACTTTGAATGTAATTGTTTCGAACTCTGAGCTGGCAAAGGAGGTGCTGAAGGAGCATGATCAGCAGCTGGCCGACCGCCATAGGAGCCGGTCGGCCGCCAAGTTTAGCCGGGACGGGAAGGACCTGATTTGGGCCGATTATGGGCCACACTATGTGAAGGTGAGGAAGGTTTGCACTCTTGAGCTCTTCTCCCCAAAGAGGCTTGAGTCTTTGAGGCCTATAAGAGAAGATGAGGTCACTGCCATGGTTGAATCCATTTTCAATGACTGCACCAATCCTGAAAACTTAGGGAAAAGTTTTTTGGTGAAGAAATACTTGGGAGCCGTGGCATTCAACAACATCACTAGGCTAGCATTTGGCAAAAGATTTGTGAACTCAGAAGGTATAATGGACGAGCAAGGAGTAGAATTCAAGGCTGTAGTGGCAAATGGATTGAAGCTAGGAGCATCTCTGGCCATGGCCGAGCACATTCCATGGCTGCGATGGATGTTCCCACTCGAAGAGGAGGCTTTCGCCAAGCACGGTGCTCGCCGCGACAAACTCACCAGAGCCATCATGGAAGAGCACACTCAAGAGCGGCTGAAATCCGGTGCCAAGCAACATTTTGTTGATGCCCTCCTCACATTGCAAGAAAAATATGACCTTAGTGAAGACACCATCATTGGTCTACTTTGGGACATGATTACGGCTGGCATGGACACAACAGCAATATCAGTTGAATGGGCCATGGCTGAACTAATCAAGAACCCAAGAGTCCAACAGAAAGCCCAAGAGGAGCTAGACAGGGTGATTGGGCTTGAAAGGATAATGACAGAATTAGATTTCTCAAGCCTCCCATACCTCCAATGCGTGGCAAAGGAAGCCCTAAGGCTCCACCCACCAACCCCACTAATGCTCCCACACAGGGCCAATTCCAACGTCAAAGTTGGTGGCTATGACATACCAAAAGGCTCCAACGTGCACGTGAACGTGTGGGCCGTGGCACGTGACCCAGCTGTATGGAAAAACCCACTGGAGTTCAGGCCTGAGAGGTTCCTTGAGGAGGATGTGGACATGAAGGGACATGATTTTAGGCTGCTCCCCTTTGGTGCTGGACGTAGGGTATGCCCCGGTGCACAACTTGGGATCAATTTGGTGACGTCAATGTTGGGTCATCTTTTGCATCATTTTAGTTGGGCCCCACCTGAGGGAACGAGGCCCGAGGAGATTGACATGTCGGAGAATCCTGGGTTGGTCACTTACATGAGTGCACCACTTCAGGCTGTGCCAACTCCTAGGTTGCCCTCACATTTGTACAAACGTGTGCCTGCTGATATTTAA 1527 0.5062 MAFLTTIIPLSLIALLFYKLYFRLRFKLPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLESLRPIREDEVTAMVESIFNDCTNPENLGKSFLVKKYLGAVAFNNITRLAFGKRFVNSEGIMDEQGVEFKAVVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDKLTRAIMEEHTQERLKSGAKQHFVDALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAELIKNPRVQQKAQEELDRVIGLERIMTELDFSSLPYLQCVAKEALRLHPPTPLMLPHRANSNVKVGGYDIPKGSNVHVNVWAVARDPAVWKNPLEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFSWAPPEGTRPEEIDMSENPGLVTYMSAPLQAVPTPRLPSHLYKRVPADI* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1848 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 501 - -
Amo06g1848 508 Pfam Cytochrome P450 29 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Amo06g1848 508 PANTHER CYTOCHROME P450 98A3 7 501 - -
Amo06g1848 508 SUPERFAMILY Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 Gene3D Cytochrome P450 23 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo06g1848 508 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1848 Amo-Chr6 67050068 67055282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1848 11 508 Monolignol Biosynthesis Gene Families AT2G40890 81.764 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1848 K09754 - rcu:8277880 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2576 16 113008361 113013963 Amo06g1848 06 67050068 67055282 hybridization