Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1826 ATGTGGAATGGGTTGCAGCCATACACGAATGTGAGAGTGAAGGAGACAGTGAGAAAGAAAGGATCAAAGGAAACCAAATCCAAGCTAACAAAACTAGCGGCCACCAGGATCAAAGCTGAGCACCCTCCATGCGATGAGGGCGAGATTCTACTATCCACCAATTTAAAGAACTTCAGCTTCATTGAACTAAGAATCGCCATAAGGAACTTTCGTCCAGATAGTGTGGTTGGTGAAGATGGCTTTGGCTATGTATTTAAGGGGTGGATGGACGAGCACACTCTTGAACCCACAAAACCGAACACCAAACTCGTCATTACGGTGAAGAGGCTAAATCAAGGGAGCACACAAGGACATAGTGAATGGCTGACAGAAATCAACTACTTGGGTCAGCTAGATCATCCTAATCTTGTGAAACTCATAGGTTACAGCTTAGAAGATGATCACCGGATTTTGGTGTATGAGTTTTTTACTAAAGGCAATTTAGATAACCATTTGTTTGGGAGAGCTTCTTATGTTCGCCCGCTTTCTTGGAACATACGCATGAATATCACACTTGATGTAGCTAAGGGCCTTGTATTTCTACACATCGACCAACTAGATGTAATATACCGAGATTTCAAGACTTCTAACATCTTGCATGATTCGAGTTATCATGCAAAACTCTCTGATTTTGGATTGGCAAAGGATGGACCAGTAGGTGACAAGAGCCATGTCCCTACGAGGATAATGGGAACATTTGGCTATGCTGCTACTGCATTAATATCCACAGAAATTATAGTAGGGAAATGCGCACTAGATAAGAACAGACCAACAGGGGAGCATAATTTGGTTGATTTCCATTACTCATCAGCAAAAGAAAAATCTCACAAGCCTACCATGGATGAGGTTGTAAGATCCTTGGAGCAACTCAAGGATTCTCAAGACACAATAACAAGTGGAGTGGAAAAATCTCAACATCAAACAGTTAAAACGAATGGTAATAGTGCAAGATCTAGTAGAATTAGTTCAAAACAACATAGAAGAAGTAACAATGAATCTTTAAATGGAGAA 1050 0.4086 MWNGLQPYTNVRVKETVRKKGSKETKSKLTKLAATRIKAEHPPCDEGEILLSTNLKNFSFIELRIAIRNFRPDSVVGEDGFGYVFKGWMDEHTLEPTKPNTKLVITVKRLNQGSTQGHSEWLTEINYLGQLDHPNLVKLIGYSLEDDHRILVYEFFTKGNLDNHLFGRASYVRPLSWNIRMNITLDVAKGLVFLHIDQLDVIYRDFKTSNILHDSSYHAKLSDFGLAKDGPVGDKSHVPTRIMGTFGYAATALISTEIIVGKCALDKNRPTGEHNLVDFHYSSAKEKSHKPTMDEVVRSLEQLKDSQDTITSGVEKSQHQTVKTNGNSARSSRISSKQHRRSNNESLNGE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1826 350 MobiDBLite consensus disorder prediction 304 333 - -
Amo06g1826 350 Gene3D Phosphorylase Kinase; domain 1 46 155 - -
Amo06g1826 350 Gene3D Transferase(Phosphotransferase) domain 1 156 311 - -
Amo06g1826 350 PANTHER KINASE 1B 34 280 - -
Amo06g1826 350 PANTHER OS01G0588500 PROTEIN-RELATED 34 280 - -
Amo06g1826 350 Pfam Protein tyrosine and serine/threonine kinase 74 230 IPR001245 GO:0004672|GO:0006468
Amo06g1826 350 SUPERFAMILY Protein kinase-like (PK-like) 48 256 IPR011009 -
Amo06g1826 350 ProSiteProfiles Protein kinase domain profile. 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1826 350 MobiDBLite consensus disorder prediction 304 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1826 Amo-Chr6 64998040 64999965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1826 45 293 Glycoside Hydrolase AT3G07070 39.552 3.98e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo06g1826 PK_Tyr_Ser-Thr 1.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1826 - - gmx:100775335 374.015