Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1807 ATGTCCACCTCCGCCAGAAAAAAGCTTCACCTGAACACAGTTTCAGTGAAACTAGGGTGTGGCAGCAGTTGCAGAAGGCCAAAACTCTCTCGAATATTCCACCCTAAACCAAAACCCAAGAACCCCACTCTCCAAAAACACAAACTTTTCAACCTCTCTTCTTGGAATCATAACGAGAACGACACCGCCACAAGCACCACCACCCCAACCAACACCACCTTCTCCCCTTGCTACATTGATTCCTCTCACTTCTCTGACTCATCAGAGAACGTAAAGGAAGCTCGGAGAGTCGGAGGTCTCGGACGAGCGGGCGGAGAAGGCGTGGCGGTGGAGAAAGACTCCGATGACCCTTACTTGGATTTCCGGCACTCCATGCTTCAGATGATTCTTGAGAACGAGATATACTCGAAGGAAGACCTGAGGGAGCTTCTCAACTGTTTTCTTCAGCTGAATTCACCCTATCACCATGGTGTTATAGTTAGAGCTTTCACTGAGATCTGGAATGGGGTCTTCTCTGTAAGGTCAAGTTCTTCAGCCAGGTTTCACTTCAACCGTAATAATAATAATAAGCCATTCCACCTTGTATAG 588 0.4762 MSTSARKKLHLNTVSVKLGCGSSCRRPKLSRIFHPKPKPKNPTLQKHKLFNLSSWNHNENDTATSTTTPTNTTFSPCYIDSSHFSDSSENVKEARRVGGLGRAGGEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKEDLRELLNCFLQLNSPYHHGVIVRAFTEIWNGVFSVRSSSSARFHFNRNNNNKPFHLV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1807 195 PANTHER TRANSCRIPTION REPRESSOR OFP6-LIKE 5 177 - -
Amo06g1807 195 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 108 168 IPR006458 -
Amo06g1807 195 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 5 177 IPR038933 GO:0045892
Amo06g1807 195 ProSiteProfiles OVATE domain profile. 110 169 IPR006458 -
Amo06g1807 195 Pfam Transcriptional repressor, ovate 114 170 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1807 Amo-Chr6 64108076 64108973 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Amo06g1807 Ovate 8.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1807 - - mtr:MTR_7g105790 226.098