Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1699 ATGGACACATCAAATCCTGCAGTTTTTGTCAATGCAGAACTCTTGCAGTTTTATGTTGGAAGGAGGGTTCGGGCTGTGATGCAGGTTGTGCGATCCGAGGGGGGCGTTGTCATTGGAAAATCAACAGATGAGAAGCAGCTAGTTGTGAAAGGACCACCCCCACCTGCACCTCTTACAAATTTTGTTGAAGTTATTGGCATTGTTGACAATGATAGATCCATTCGAGCTGAGATATGGACCAATTTTGGCAATGTGATTGGTATGTTTTACTCTTCACATTCCATTTCGCAAGTTGGTTCTCATATTGGTTTGTGCTTGGAGTATGAATGA 330 0.4303 MDTSNPAVFVNAELLQFYVGRRVRAVMQVVRSEGGVVIGKSTDEKQLVVKGPPPPAPLTNFVEVIGIVDNDRSIRAEIWTNFGNVIGMFYSSHSISQVGSHIGLCLEYE* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1699 109 Pfam Replication factor A protein 3 1 85 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Amo06g1699 109 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 89 - -
Amo06g1699 109 SUPERFAMILY Nucleic acid-binding proteins 6 84 IPR012340 -
Amo06g1699 109 Gene3D - 2 95 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1699 Amo-Chr6 58706406 58709343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1699 1 84 Core DNA Replication Machinery Family AT4G18590 64.286 1.06e-35 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1699 K10740 - vvi:100264936 139.428