Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1654 ATGATGGACTTATCACTACACAAGCAACTCTTCCCCCTCCTCTCTCTTCTCTTAATTCTATTTCTTTCAGGACAAAGGATGCAAGCAGAGGCTAATAATAGCCTTCAAAATCCCCAACTCTGTGAACCAACCAAGAAACTCTTCGTTTTTGGAGACTCATATGCTGACACCGGCAACATCAGAAAAAGTCTCTCCAATTCATGGAAAGACCCCTACGGCATCACCTTTCCCGGCAAGCCAGCCGGTCGATTCTCCGACGGAAGGGTCCTCACCGACTACATTGCTAAGTACCTGGGAGTGAAAACACCTGTGCCATACAGATTTCGGAAGCAAATGGCGCAGCAGCTGAAGTACGGCATGAACTTTGCAGTGGGTGGAACTGGCGTATTTGACACGTCTACTCCAGGGCCCAACATGACCACACAGATCCAATTGTTGGAGCAACTCATCCACGACGGACTCTACACCGCTTCTGATCTAACCAACTCCATCGCTCTTGTCTCTGTTGCTGGTAACGACTATAGTCACTACCTTGCCACTCATGCCTCTCCTCAGGGTCTACCATATTTCGTGGCGTCAGTGGTGAATCAAACAACAAGGAATCTGATGCGGATCAAAGCATTGGGGGTAAAGAAGATCATAGTTGGCAGCCTCCAACCCCTTGGATGCCTCCCTCAGGTCACAGCCTTCTCGTCCTTCCAACAATGCAACGCCTCTTCCAACACCTTGGTGGCTTTCCACAACAACCTCTTGAACCAAGCAGTTACCAATTTGAACCAATCGTGGTCGTCGTCCTTCGCGGTTCTCAACCTCTACGACAGCTTCATGTCCGTCCTAAACCACCCTACGACGCACAACATCCAGAACCAGTTGCGGCCGTGCTGCGTTGGCGTAAACAGCAAGTATTCATGTGGGAGTGTGGATGAGAATAACGTGAAGATGTATAGGGTTTGCGACGATCCCAAATCAGCCTTCTTTTGGGATCTGGTGCACCCCACGCAGGCCGGGTGGCATGCCGTGTATAACAAGTTAAGAACCATGAATGCTCTTCAAGGAATTCAGTTCTAG 1068 0.4953 MMDLSLHKQLFPLLSLLLILFLSGQRMQAEANNSLQNPQLCEPTKKLFVFGDSYADTGNIRKSLSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLGVKTPVPYRFRKQMAQQLKYGMNFAVGGTGVFDTSTPGPNMTTQIQLLEQLIHDGLYTASDLTNSIALVSVAGNDYSHYLATHASPQGLPYFVASVVNQTTRNLMRIKALGVKKIIVGSLQPLGCLPQVTAFSSFQQCNASSNTLVAFHNNLLNQAVTNLNQSWSSSFAVLNLYDSFMSVLNHPTTHNIQNQLRPCCVGVNSKYSCGSVDENNVKMYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMNALQGIQF* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1654 355 Pfam GDSL-like Lipase/Acylhydrolase 47 343 IPR001087 GO:0016788
Amo06g1654 355 PANTHER OSJNBB0059K02.9 PROTEIN 6 354 - -
Amo06g1654 355 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 354 - -
Amo06g1654 355 SUPERFAMILY SGNH hydrolase 44 344 - -
Amo06g1654 355 CDD SGNH_plant_lipase_like 47 344 IPR035669 -
Amo06g1654 355 Gene3D SGNH hydrolase 39 351 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1654 Amo-Chr6 55865392 55872119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1654 13 340 Pollen Coat Proteome AT1G75930 26.496 1.30e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1654 - - gmx:100788092 511.531