Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1652 ATGGGATTAGAGTCACAACTTGATTCTCTGGAAGTCATAATCAAGGACCTTCAAGCAGAGACCATGTTTTTCGGAGGGTCTTGTGGAGATAAGGGAAGACTTATAGAAGGTTCTTACAAAGGAAAAACTAAATCAGCATCTTTTATTGATGCATTGGCTCCGGCAAAACTTGAAGGAATTCTCATGAGCCACCCTTCCATTGAAGATGCAGCTGTTGTTCTGCAAAAAGATGATGTAGCTGGTGAAGTTCCAGTTGCTTTTGTGGTGAGGTCATCAAATGATCCTATTACTGAAGATGCTGTCAAGGACTTTATAGCTAAACAGAGTGGCATTTATTACGGAGCCCCTGTTTATGATGGTTATGGATATGCATTGCCTCCTCCTCATGATCCAAGCATATATGCTGCTGCCTACGCTGCTTACCCTATCTGA 432 0.4213 MGLESQLDSLEVIIKDLQAETMFFGGSCGDKGRLIEGSYKGKTKSASFIDALAPAKLEGILMSHPSIEDAAVVLQKDDVAGEVPVAFVVRSSNDPITEDAVKDFIAKQSGIYYGAPVYDGYGYALPPPHDPSIYAAAYAAYPI* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1652 143 SUPERFAMILY Acetyl-CoA synthetase-like 53 111 - -
Amo06g1652 143 Pfam AMP-binding enzyme C-terminal domain 56 111 IPR025110 -
Amo06g1652 143 Gene3D - 44 129 IPR045851 -
Amo06g1652 143 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 52 110 - -
Amo06g1652 143 PANTHER 4-COUMARATE--COA LIGASE 2 52 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1652 Amo-Chr6 55858705 55862307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1652 52 112 Monolignol Biosynthesis Gene Families AT4G05160 59.016 6.04e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1652 K01904 - adu:110272335 167.162