Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1641 ATGTCACAGAATTTGCCACTGCCACTGCTACTTCTCTTTTGTTTCTTTTGTTCACCCATACTTATCCAAGGATCAAATCAAAATGAAAGAAAGCCGTACATTGTATACATGGGAGAATTACCAGAGAATAGAAGTTATGCCGTGGAAGACCACCACCATAATCTACTGACTGCAACGATTGGAAACAAGAAGTTAGCGAGAGTGTCGAAAATACATAGCTATGGAAAGAGCTTCAACGGATTCGTTGCACGACTTTTGCCACATGAAGCAAAGAAACTGCAAGAGGAGGAGAATGTTGTATCTGTGTTCCCAAACAAACGGCAAAAATTACACACGACAAGGTCTTGGGATTTCATAGGAATGACCAAGAAAGTGAAGAGACGCAGCAACATAGAGAGCCACATCATTGTGGGTGTGCTAGATACAGGAATATGGGTTGATTGCCCCAGTTTCAACGATAAAGGGTATGGACCTCCACCACGACGATGGAAGGGCAAATGTGTTACGGGAGCCAACTTCACTGCTTGCAACAACAAGGTGATCGGAGCAAAATACTTCAACCTGGACCCAGTCAGCCAAATGCCCGACAACATCAGCCCGGCGGACGACCAAGGCCACGGTACTCACACTTCCTCCACAGCTGCAGGCGTAGCCGTGGAGGGTGCAAGCCTCTACGGCATTGGCAAAGGCACTGCACGTGGTGGCGTCCCGTCTGCCCGCATCGCCATGTACAAGGTTTGCTGGACTGTTGGATGCAGCGACATGGACATGCTTGCCGGCTTCGACGAGGCCATTGCTGACGGCGTCAATTTAATTTCGGTCTCAATTGGAGGGCCTTCCAGGGAGTTCTTCAATGACCCTATTGCAATTGGTGCATTCCATGCTATGAAGAGAGGGATTCTCACTTCTTGCTCTGCCGGCAATGACGGTCCTCACCTTTCCACTGTTGAGAATGTTGCTCCTTGGATACTGACGGTGGCTGCTTCCACCGTTGATAGRCAGTTCACGACGGTGGTATCCTTGGGGAATGGCAAGAACACCACAGGACTATCTATCAATACCTTTTGCCCCGAGCAGAAGATGTACCCGTTGACTAATGGAGTGCTTGTTGCTAACAGAACTGGAGATGGCTATGGCAATCCAATTTCTTGTGATTATGGGACATTACAGAAGGACAAGGTGCAGGGAAAGATAGTGTACTGCCTAGGGGGAATGGGTAATCAAGACTTGATCATCAAAGAATTGGGTGGAGCAGGGACTATCATAGGCCTTGATAACAGAATAGATGACTCCTACAACGTAGTTATTCCAGCTACGTTTGTTGAAGCCAATACTGATGGCAGAGACATTGATCTCTACATCAATTCCACAAAGGATGCTACAGCAGTGATACACAAGACAACAAGTACAAAGATCCCTGCTCCATTTGTTGCTTCTTTCTCATCAAGAGGCCCTCAATTTATCAACCCAAACATCCTCAAGCCTGACTTGGCTGCTCCAGGACAAGACATTCTGGCTGCATTTTCCAAATTGGCAACAATAACAGGGTACCCTCAAGACTCACGTTATGAAGTTTATAATATATTATCAGGGACATCAATGGCTTCCCCACATGCCATTGGAGCTGCTGCCTATGTCAAATCTTTCCACCCTGATTGGAGCCCTGCTGCAATTAAATCAGCCCTCATGACCACTGCCACCCCCTTGAAAACAAGTGATAATTTCTCGGAGCTGGCAGCTGGGGCAGGACAGATAAACCCAGCTGGAGCAGTTCATCCTGGCTTAGTTTATGACATTAGAATAGACTCCTATGTCGCCTTCCTATGCAAGCAAGGCTCCAATGCCACCAACATTGGCATGCTTATAGGCACCAAGAATTTTGACTGCGCAAGCGCCAAGCTCGCGCAAGGCACCGATGGACTCAACTACCCCACCGTGCATCTCCAGCTTATGTCTGCTAATGAAAAGATTTCCGCAGTCTTTCATCGGAGAGTGACTAATGTAGGATATGGGACCGCAACATATAAAGCTAAAGTTACAGCACCTGAGGGTGTTTCAGTTWAGGTGATCCCAGATACGTTGGTGTTTAGTGGATTGCATCAAGAGCTGTCGTTTAAAGTTGTCTTAAAGGGGCCACCAATGGCGAACGAGACACGGGTGTCGACTGGATCAATTGAATGGCAAGATTCTAAACACAACGTCAGAAGTCTCATACTCGTATACAAATCAATGTTGTAA 2238 0.4701 MSQNLPLPLLLLFCFFCSPILIQGSNQNERKPYIVYMGELPENRSYAVEDHHHNLLTATIGNKKLARVSKIHSYGKSFNGFVARLLPHEAKKLQEEENVVSVFPNKRQKLHTTRSWDFIGMTKKVKRRSNIESHIIVGVLDTGIWVDCPSFNDKGYGPPPRRWKGKCVTGANFTACNNKVIGAKYFNLDPVSQMPDNISPADDQGHGTHTSSTAAGVAVEGASLYGIGKGTARGGVPSARIAMYKVCWTVGCSDMDMLAGFDEAIADGVNLISVSIGGPSREFFNDPIAIGAFHAMKRGILTSCSAGNDGPHLSTVENVAPWILTVAASTVDRQFTTVVSLGNGKNTTGLSINTFCPEQKMYPLTNGVLVANRTGDGYGNPISCDYGTLQKDKVQGKIVYCLGGMGNQDLIIKELGGAGTIIGLDNRIDDSYNVVIPATFVEANTDGRDIDLYINSTKDATAVIHKTTSTKIPAPFVASFSSRGPQFINPNILKPDLAAPGQDILAAFSKLATITGYPQDSRYEVYNILSGTSMASPHAIGAAAYVKSFHPDWSPAAIKSALMTTATPLKTSDNFSELAAGAGQINPAGAVHPGLVYDIRIDSYVAFLCKQGSNATNIGMLIGTKNFDCASAKLAQGTDGLNYPTVHLQLMSANEKISAVFHRRVTNVGYGTATYKAKVTAPEGVSVXVIPDTLVFSGLHQELSFKVVLKGPPMANETRVSTGSIEWQDSKHNVRSLILVYKSML* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1641 745 ProSiteProfiles Serine proteases, subtilase domain profile. 115 591 - -
Amo06g1641 745 CDD Peptidases_S8_3 108 567 IPR034197 -
Amo06g1641 745 CDD PA_subtilisin_like 338 464 - -
Amo06g1641 745 Gene3D Peptidase S8/S53 domain 135 604 IPR036852 GO:0004252|GO:0006508
Amo06g1641 745 SUPERFAMILY Subtilisin-like 110 595 IPR036852 GO:0004252|GO:0006508
Amo06g1641 745 Pfam Subtilase family 133 583 IPR000209 GO:0006508|GO:0008236
Amo06g1641 745 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 111 IPR037045 -
Amo06g1641 745 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Amo06g1641 745 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Amo06g1641 745 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Amo06g1641 745 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 137 147 IPR023827 -
Amo06g1641 745 Pfam Fibronectin type-III domain 641 740 IPR041469 -
Amo06g1641 745 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 743 IPR045051 -
Amo06g1641 745 PANTHER CUCUMISIN PROTEIN 22 743 - -
Amo06g1641 745 Gene3D - 608 743 - -
Amo06g1641 745 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
Amo06g1641 745 Gene3D - 332 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1641 Amo-Chr6 55391443 55397298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1641 9 565 Subtilisin-like Serine Gene Family AT5G03620 61.444 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1641 - - aip:107648262 1469.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2350 16 99056200 99061588 Amo06g1641 06 55391443 55397298 hybridization