Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1640 ATGGAAACAGAGAAGCTGTGTGCTTTGAGCTATTCAACTTCTTCGTCTGCCTCGGAGGAGCACCGTGTGGATCGCCTCATTAAGACAGAGATTGAAGCGGCAGAGACTCTTGCTGACTTGGCAAACCTCGCCATGCGCGAGGCCACCGCCTCTCGTTCCACCCACGCACCACACTTCACGCGGCACTCGCACTCGGATCTCTCTAGCTCTGCCCCTCTCCCCGGGGGAGAAGCTATTGCAGGCCAGCAGCTAGATGAACGATCAGTTGCTTGTAATTCTGAACAAAGAGAAGGGAGGCAGGATGACTGTGCAAGACATATGAAGATGGAGCAGGATGCTGATTCACTGAAGACTACTAGTTACTCTGCGGTTCGCTGCAGCAAGTCAAGGCGTAATTTAACTGAGGAAGAAAAAGAAGCACGGAGGATTCGCAGAATATTGGCAAATAGAGAGTCAGCAAGGCAGACAATCCGTCGTAGACAGGCTCTGTGCGAAGATTTAACCAGAAAAGCTTCCAATTTAGTGTTGGAGAACGAAAATCTGAAGAAGGAGAAGGATTTGGCTTTGAAAGAGTATCAGTCTTTGGAGACTACAAATAAGCATTTAAAGGCACAAATAGCCAAGACAATAAACAGTGAGGTAGCCAAAGCTCCTGTTGAACAGGAATCATCTATGGCCGAGGTAACAAATTTATCTGGTAATGCCCCATGGTTCGTTTGTAACCATTTTCCAGTTACACAATTATTTTGGCCTCCCATCATTCAGTCTTCTAATCCAGTTCAAGTACAACATCCACCATTTAGTTCCATTCCCGTTCCGCCTACTGTTTCTCTGCCGTGCTCTTCTGAGACCGGCTCATTTCACAAGCAAAATAACCTTGCAAATGACAATAGGACACAAAATCCATTATATATGGTACAATGTCCCTGGTTATTCCCTGTTCCAGATTTTGGAAATGGACAACCAGCCCCACCTTCCATTGGCCTAATTGATAAACGAGATGAACTTTCTCTAGGTAAACAGTGTAGTTCTTCTTTGTCTTTGAATACAGCGGCAACTGTGGATTATCAACCAGATCTACCATTGAAAGCTAAAACTGTAGCTTCTGGGTGGACAGAGGCYRGATCAACTCATGATRCTGGCCACACAACTATAATGTTTCCATTGAATGGAGCTGAGCAGAAAACTGGAAGTCACATTATAGGGAACTTCCATGGACCTTCACTTGATCATAATGGGCATGTATCTGCTGTCAAGCAAGAGCAAGAACACGATCTCGAGCTTCAACTACATTCTGTTCCTAAGTTATCTCTGTCTTCAACAACATCTCACACTGCAACTTCTCCGCAGGAAAAGCAACAAACAAAGGTCTTATGCTCAGGTAAAAATGTAGTGGATGCTGTTGCTGCGGCAGAGGCAAGAAAGAGGAGAAAAGAACTAACTAGGTTTAAGAGCATCCATAACCGACAGTCCGGAATGCATTGTTGA 1488 0.4503 METEKLCALSYSTSSSASEEHRVDRLIKTEIEAAETLADLANLAMREATASRSTHAPHFTRHSHSDLSSSAPLPGGEAIAGQQLDERSVACNSEQREGRQDDCARHMKMEQDADSLKTTSYSAVRCSKSRRNLTEEEKEARRIRRILANRESARQTIRRRQALCEDLTRKASNLVLENENLKKEKDLALKEYQSLETTNKHLKAQIAKTINSEVAKAPVEQESSMAEVTNLSGNAPWFVCNHFPVTQLFWPPIIQSSNPVQVQHPPFSSIPVPPTVSLPCSSETGSFHKQNNLANDNRTQNPLYMVQCPWLFPVPDFGNGQPAPPSIGLIDKRDELSLGKQCSSSLSLNTAATVDYQPDLPLKAKTVASGWTEAXSTHDXGHTTIMFPLNGAEQKTGSHIIGNFHGPSLDHNGHVSAVKQEQEHDLELQLHSVPKLSLSSTTSHTATSPQEKQQTKVLCSGKNVVDAVAAAEARKRRKELTRFKSIHNRQSGMHC* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1640 495 Pfam bZIP transcription factor 137 199 IPR004827 GO:0003700|GO:0006355
Amo06g1640 495 MobiDBLite consensus disorder prediction 419 455 - -
Amo06g1640 495 PANTHER G-BOX-BINDING FACTOR 3-RELATED 12 490 IPR044827 GO:0003700|GO:0006355|GO:0043565
Amo06g1640 495 Coils Coil 164 205 - -
Amo06g1640 495 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 139 202 IPR004827 GO:0003700|GO:0006355
Amo06g1640 495 SMART brlzneu 137 201 IPR004827 GO:0003700|GO:0006355
Amo06g1640 495 SUPERFAMILY Leucine zipper domain 141 196 IPR046347 GO:0003700|GO:0006355
Amo06g1640 495 MobiDBLite consensus disorder prediction 90 113 - -
Amo06g1640 495 MobiDBLite consensus disorder prediction 48 116 - -
Amo06g1640 495 MobiDBLite consensus disorder prediction 433 455 - -
Amo06g1640 495 CDD bZIP_plant_GBF1 142 193 IPR045314 GO:0003700|GO:0006355
Amo06g1640 495 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 12 490 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1640 126 495 bZIP Transcription Factor Family AT1G19490 38.275 6.30e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo06g1640 bZIP_1 3.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1640 - - ahf:112754487 879.396