Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1634 ATGGGTTCATTCTCTGGCACTTCTGAAATAGTTGAAGCAACAGACGAGCTAAATACAGGGAAAACTACAGCAAGTAATCAGTCCAATAATGCGTGTAGCATGGCTGAGAAAAATCAGAAGCCTCGGGTGCTGAAACTGGGCTACAAGGACAATCTGGACGACGATATTAATAAGCTTTTTGAATCAATTACTCTTAAATCTTCATCAAGAGACTTGGGCCATTTACAAGATGGTACAAGCCCTAAGATGAAAAGTGCATTGAAAAAGCCCATCACAGTGGGTGTTTCTCGGTCCCCGCGAGTTGGGACATCTGAACCTGTGAATTTGAAGCAGGCTTTAAGAGACCTTTGTATTTCTAAGGCATCAGAAATGGCTGCTATGAAACGATTATCAAAAGCAACAGCTTCTCCAAGAATATCAGAGGTTGGGAAGATACAAACATTGTACAATTCAGTTGTAGCTGAAACCAGTCTACCTGGCCCTCCTTTGGTTGAAAATAAAGAGAATGGAATTGAAATATCCCTAGTGCCAGAAGAAAGTAAGTCAGTTTCGATGGAGAAAACATCTCATTCTTATCAAGGTGCTGAAATCACTTCACCAAGCCAGATCATTCGATCTTCTCCTAAAGTTGCTGTTGCAACCATTCAACATACTTCTAATGCTTCATTGCCGCAAGTTGATTTGGCATGTTCATCAAGTAAAGTTGGGGTTCACTCACGGCAAGTGGTGCCTGTTCAATCAGAAAAACCACCAACATCTCCCTCTCCATCTCCATGTACCACAACTGGAAGCAAATTGGAGTCATCCAAAATTGTTTCTTCTCCTAAAAAAGTTGGAAATAAACCATCTATATCAAATAATGGGCATAAAGGTAGATTGCAAACATCTTCCTCATCTTCTTCTGTAAATGGCTATAGAGTAAACAAAGTGTCACGTCATACCCCCCGTGCAGTCAAATCAGTCCTCAAGAGCAAGAATTTGAGTAAGAAAAAGCTAAAAGAGTGTTCTGGCTCTGGTTTGTGCAATCCTTCAACCAATAAAGTGAATAATAAGCCAGCTCCTGTTCTAACTCGAATGATTTGCGAGAGATGTCATTGTGCTTTAGAGAATACAAGTGAAGAAAAAGGCCACCATATCACAACACTGGACTCCATCAGTCCTGAAGTGGTGAACTCAGGTGAAGAGCACCATGGTTCAGATAAACCTGATCTGGCATCAACTAACAGTAACAAAGGCAGACCGATTGCAAACGTGAAAAAGAGCACTAAGTTGAAAGACCAACTTGAATTTTCACAAAGTTCAAAAAGTAGCCAAGGTGAGTACAGTAGTAGCACAAGCACCAGTGGCGAAAGTAATGCAAGTGGCTCAAGTTGTGGAACTAGGCCTCACATGTCAAAAGATTTTAGGTGGGAAGCCGTACGACGTGCTCATTTGGAGTATGGAGTCTTGGGCTTGAGACATTTCAATCTTTTGAAGAAACTTGGTTGTGGGGACATTGGGACAGTATATCTTGCTGAACTAATTGGCACAACTTGCTTGTTTGCTATCAAGGTCATGGATAATGAGTTTTTGGCAAGGCGGAAGAAGATGCCAAGGGCACAAACTGAGAGAGAAATATTAAGCATGCTGGATCATCCATTTCTTCCCACATTGTATGCACAATTTACATCAGATAATCTGTCATGCCTGGTTATGGAGTATTGTCCAGGGGGAGATCTTCACGTTCTACGTCAGAAGCAGCTTAGTAGGTGTTTTTCAGAGACAGCAGCAAGGTTTTATGTTGCCGAAGTCCTTCTTGCTTTAGAGTACTTGCACATGCTTGGAGTTGTTTATCGTGACTTGAAACCTGAAAACATTCTTGTCCGGGAAGATGGACACATCATGCTCACAGATTTTGACCTTTCACTAAGGTGTGCAGTTAGCCCAACGCTTCTACAATCCTCTTCCGAGATTGAACCAGCAAAAAGTTCTGGCCCTACCACAAAACCAAGTTGCATTGAGCCATTCTGCATTGAGCCCGCTTGTCAAGTTCCATGCTTCAGCCCTAGATTCTTACCCGCAGCAGCAAAAGCAAGGAAACTAAAAGTTGATCTTGCAGCCCAGATTAGATCATTGCCACAGCTTGTGGCCGAGCCCACCGATGCCAGATCAAACTCATTTGTTGGAACACATGAATACTTGGCTCCTGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGACTGGTGGACGTTTGGGGTTTTTCTTTACGAGCTCTTATATGGTAGAACACCCTTCAAAGGCTGCAATAATGAAGAAACACTAGTGAACGTGGTGTTGCAGAGTCTTAGGTTCCCCGACAGCCCATTTATTAGCTTCCAAGCGAGGGATCTGATAAGAGGGTTGCTGGTTAAGGAACCTGAGAACCGTTTGGGATCAGAGAAAGGTGCTGCTGAGATTAAACAGCATCCTTTCTTTGATGGCCTCAACTGGGCCTTAATTCGTTGTGGTCTCCCACCAGAGATTCCAGAGTATTGTGATTTTGGAGTTTCTGATGTGACACCAGAAAGCAAGGGTGGTAAGTATTTAGAGTATAATGCAACTGGAGAGCATCTGGAGTTCGAGTTGTTCTAA 2616 0.4289 MGSFSGTSEIVEATDELNTGKTTASNQSNNACSMAEKNQKPRVLKLGYKDNLDDDINKLFESITLKSSSRDLGHLQDGTSPKMKSALKKPITVGVSRSPRVGTSEPVNLKQALRDLCISKASEMAAMKRLSKATASPRISEVGKIQTLYNSVVAETSLPGPPLVENKENGIEISLVPEESKSVSMEKTSHSYQGAEITSPSQIIRSSPKVAVATIQHTSNASLPQVDLACSSSKVGVHSRQVVPVQSEKPPTSPSPSPCTTTGSKLESSKIVSSPKKVGNKPSISNNGHKGRLQTSSSSSSVNGYRVNKVSRHTPRAVKSVLKSKNLSKKKLKECSGSGLCNPSTNKVNNKPAPVLTRMICERCHCALENTSEEKGHHITTLDSISPEVVNSGEEHHGSDKPDLASTNSNKGRPIANVKKSTKLKDQLEFSQSSKSSQGEYSSSTSTSGESNASGSSCGTRPHMSKDFRWEAVRRAHLEYGVLGLRHFNLLKKLGCGDIGTVYLAELIGTTCLFAIKVMDNEFLARRKKMPRAQTEREILSMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLSRCFSETAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLQSSSEIEPAKSSGPTTKPSCIEPFCIEPACQVPCFSPRFLPAAAKARKLKVDLAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGCNNEETLVNVVLQSLRFPDSPFISFQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFDGLNWALIRCGLPPEIPEYCDFGVSDVTPESKGGKYLEYNATGEHLEFELF* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1634 871 SUPERFAMILY Protein kinase-like (PK-like) 465 839 IPR011009 -
Amo06g1634 871 SMART serkin_6 488 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1634 871 MobiDBLite consensus disorder prediction 258 308 - -
Amo06g1634 871 Gene3D Phosphorylase Kinase; domain 1 487 571 - -
Amo06g1634 871 Pfam Protein kinase domain 489 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1634 871 Pfam Protein kinase domain 717 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1634 871 MobiDBLite consensus disorder prediction 427 461 - -
Amo06g1634 871 MobiDBLite consensus disorder prediction 239 325 - -
Amo06g1634 871 CDD STKc_phototropin_like 486 838 - -
Amo06g1634 871 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 871 - -
Amo06g1634 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Amo06g1634 871 Gene3D Transferase(Phosphotransferase) domain 1 713 829 - -
Amo06g1634 871 Gene3D Transferase(Phosphotransferase) domain 1 572 637 - -
Amo06g1634 871 MobiDBLite consensus disorder prediction 389 461 - -
Amo06g1634 871 ProSiteProfiles Protein kinase domain profile. 488 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1634 871 MobiDBLite consensus disorder prediction 1 36 - -
Amo06g1634 871 PANTHER FLIPPASE KINASE 1-RELATED 1 871 - -
Amo06g1634 871 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1634 Amo-Chr6 55103297 55108439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1634 1 871 AGC Kinase Gene Family AT2G36350 52.555 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Amo06g1634 Pkinase 5.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1634 - K08286 gmx:100792120 1228.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g1634 06 55103297 55108439 Amo12g3458 12 123783682 123788552 PCT
Amo12g3458 12 123783682 123788552 Amo06g1634 06 55103297 55108439 PCT