Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1602 ATGGGTCACAAGTCCTTGTTACAGGAGCTTCTGAAAGAAGAGCAAGAGCCTTTCCTACTAAACAAGTACATTTCCGATAGGAGAACCCACATGAAGACCACCACTACTACTCTCGTCTACAGCAAACAACGCAGCACAACTTTCCCACTCAATCTCTGCAAGAACGCATGCTTCTCCACCTCCACTACCACCACCACCACCACCACTAAATCCCCTCTCTTGGAACTCCCATCGCCCAATAATAACAAGAAGCCCATATTCCTTCACATTCCTTCTCGAACCGCCGCGCTTCTTCTCGAAGCCGCTCTCAGGATCCACAAACACAAAAAGACCAATCACGGCTTCGGCCTATTGGGCTCCTTCTTCAGGAGACTAAAGCAGAACCGCCGCAAGCACAAGCTCAAGGTGAGCTCCCTCAAAGATCGAGAAAATGTGATTAATAGATCCTACGAGTTGGGGTTTCGATGTTCATACTCTGTTTGGTCAGAGAGCAACGATGATGAGTCTCTCGACATGGAAACCTCAAGTAGCACTAGTACGAACTTTGATGACCACCACCACCGCCATATTATTCACAATGGAGGATTCTGTGAAAGCCCATTCCGTTTTGTTCTTCAAAAGAGCCCCTACTCCTCCTCCGGCCTCAACACGCCGGAGCTACCTTCACCTCCGCCCTCATCACCACAGACTCCCCACACTACGCAGGACAAAGAAAGTAACGGCGGTGAGAGTGTGCATAAATTCCGATCGGGGGAACTAGAAGAAGATAAGGAACAGTGTAGTCCCGTGTCTGTTCTAGACCCACCCTTCGAGGACGATGACGAAGCGCATGGAAACGACGACGAGGACGAAAATGAGGAGCATGGTTTCGATTTGGAGTGCAGCTATGCCATAATGCAGAGAACTAAGCAGAAGCTATTGTACAAGCTTCGTAGATTCGAGAAACTCGCGGGGCTAGATCCGGTAGAACTCGAGAAAATAATGCTGGATCAAGAAGAGGAGGAGGATGAAACGGTCATGGAAGATGATGGATATGTATACGAGGCCAGTGAAGCATTATCGTGTAAAGAAAATTGCTTGATAGAACAAGTATTTGAAGCTCTCTTTGAGTCATCAAGACTTCAATTCCCAGAAGGCCTTAAGAGACTTGTATCTGATGTCATTGCAGAGGAAGAGAGGGAAATTGAGTGCTTAGAAGATTATAATAATAGGGACATGGTGGTGAGAAAGGTGTGCAAGAGAATGGAGCTTTGGAAACAAGTGGAGTCAAACACAATTGACATGATGATAGAAGAAGATTTTACAAGAGAGGAAAATGGTTGGAAGAAGAAAAATGTGGATCAGATAAGGGACATGGCTGGGGAGCTTGAACTTGCTATCTTTGGATTTCTAGTTGAAGAATTCTCAGAGGAGCTAGAATGTTAA 1425 0.4618 MGHKSLLQELLKEEQEPFLLNKYISDRRTHMKTTTTTLVYSKQRSTTFPLNLCKNACFSTSTTTTTTTTKSPLLELPSPNNNKKPIFLHIPSRTAALLLEAALRIHKHKKTNHGFGLLGSFFRRLKQNRRKHKLKVSSLKDRENVINRSYELGFRCSYSVWSESNDDESLDMETSSSTSTNFDDHHHRHIIHNGGFCESPFRFVLQKSPYSSSGLNTPELPSPPPSSPQTPHTTQDKESNGGESVHKFRSGELEEDKEQCSPVSVLDPPFEDDDEAHGNDDEDENEEHGFDLECSYAIMQRTKQKLLYKLRRFEKLAGLDPVELEKIMLDQEEEEDETVMEDDGYVYEASEALSCKENCLIEQVFEALFESSRLQFPEGLKRLVSDVIAEEEREIECLEDYNNRDMVVRKVCKRMELWKQVESNTIDMMIEEDFTREENGWKKKNVDQIRDMAGELELAIFGFLVEEFSEELEC* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1602 474 MobiDBLite consensus disorder prediction 273 287 - -
Amo06g1602 474 MobiDBLite consensus disorder prediction 208 287 - -
Amo06g1602 474 Coils Coil 122 142 - -
Amo06g1602 474 MobiDBLite consensus disorder prediction 239 261 - -
Amo06g1602 474 PANTHER OS04G0572500 PROTEIN 2 474 - -
Amo06g1602 474 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 2 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1602 Amo-Chr6 52223329 52226502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1602 4 472 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 33.733 1.26e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1602 - - gmx:100814311 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2308 16 94988278 94991373 Amo06g1602 06 52223329 52226502 hybridization
Amo06g1602 06 52223329 52226502 Amo12g3455 12 123747502 123751926 PCT
Amo12g3455 12 123747502 123751926 Amo06g1602 06 52223329 52226502 PCT