Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1581 ATGGAAATGGAGGATCATCATCATCAACACCAACAGTATGGCGGCATCACTGATCTGAGGCAGCTTGTGAGTAACAACGGACCCCGTTCAACACATTTTCCTACTTCCATACCGCCACAGCCCACGGCGGAGCTCTTCCCGGGCCACCCAAACCTCGCGGCTGCGCATCAGCAGCAGCACTACGAGCTGATGATGTTTGGGCGCCAAGTAGCTGACTTAATGCCTCGCTGTCTCCACGACTTTGCTGACGCCAGCAATAATAACACAAGCAGCATAGGTGTTGCCACTGTCACTACTCCCACCACAACCACAAGCGCTTCAACTCCTCCTCTTAGTGGGTTGGGCGGCGCTGAGGCTGCAGGATGCTTAGGTGGAGACGCATCCACTGGAAGATGGCCTAGACAAGAGACTCTTACTCTTCTTGAGATCAGATCTCGCCTTGACCCCAAATTCAAAGAAGCTAATCAGAAAGGTCCCCTCTGGGATGAAGTTTCTAGGATCATGTCTGAAGAGCATGGATACCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAATCTGTACAAGTATTACAAGAAGACAAAGGAGGGAAAAGCTGGAAGACAAGACGGGAAGCATTACCGATTCTTTCGCCAACTCGAAGCCTTATACGGTGAAAGCAACAGTAACAACAGCAACGCTGCCTCAGCACAAGAAACCAATTTTGGTGGTAGCAACACCCTCCATTACCAAAACAATCCTCATGCTTTCAATTCCCAACATCAGATGAATAACCAAGAAATGCTGCTTCTTGGTTCCCAGAACAGCCTAAGCCTCACCAACTCCACTGAGTTTGAAACCTCTTCTTCGGATGATGATGATCACAATAGCACTGGGGGAGTGAAGGGGAACGATGAGTCCATGGAGAAGAGGAGGAAGAAGAGAGGAGGGAGCAAGAGCTGGAAGGTGAAGATAAAAGACTTCATTGACTTGCAAATGAGGAAGCTTGTGCAGAAGCAAGAAGAGTGGCTTGACAAGCTTATGAAGACGCTGGAACAGAAGGAGAAAGAGAGGGTTCTGAGAGAGGAAGAGTGGAGGAGACAAGAGGCAGCCAGGTTGGAGAGGGAGCACAAGTTTTGGGCCAAAGAGAGAGCATGGATTGAAGCAAGGGATGCTGCTTTAATGGAGGCCTTGCACAAGCTGACAGGAACTGATCAGGTAAAGTCTCATCATCATCATCATGATGGGATAATAACTGGTTCCGCAATGCAAAATAAGGACCATAACGAAGATGATGAAAACTGGCAAGAATGTGAGATATCAAGGCTTGTTCAGTTGAGAGCTGAGATGATGGAAACAAGTTTTAGGCATGGTGGTGATGGTTGTTCAGAAGAGGCTTTGTGGGAACAGATAGCAACAAAAATGGCATGTTTTGGGTATGAAAAGAGTCCAGTAAAGTTGAAAGAGAAATGGGAAACAATCAGCAAAGAAAACAACAAGAAGAAGCGGAAGGAGAATAACTCAAACTCAGTACGAAGTAGTAGTTCTTGTTTTTACATTGAAAACAATAACAATGACCATTATTCTTCTTCTTCTTCTCTATATAACAACAACAACAACAACCAAAGTGGTGGTGGATACTGTGATATCAACAATGATCAAAGGCGGCAACAACAATCACCTTCGAATTCCAACGCTAATGCATCAGTTCATCAAGCTGAGAACTGTTTCCCATTCTTGATGAGTTGTGAGGGAGGAACTTTGTGGGACAACTACAGCTTAAAGGTTAATAAACCAAATCAAAATCAGTAG 1794 0.4565 MEMEDHHHQHQQYGGITDLRQLVSNNGPRSTHFPTSIPPQPTAELFPGHPNLAAAHQQQHYELMMFGRQVADLMPRCLHDFADASNNNTSSIGVATVTTPTTTTSASTPPLSGLGGAEAAGCLGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGESNSNNSNAASAQETNFGGSNTLHYQNNPHAFNSQHQMNNQEMLLLGSQNSLSLTNSTEFETSSSDDDDHNSTGGVKGNDESMEKRRKKRGGSKSWKVKIKDFIDLQMRKLVQKQEEWLDKLMKTLEQKEKERVLREEEWRRQEAARLEREHKFWAKERAWIEARDAALMEALHKLTGTDQVKSHHHHHDGIITGSAMQNKDHNEDDENWQECEISRLVQLRAEMMETSFRHGGDGCSEEALWEQIATKMACFGYEKSPVKLKEKWETISKENNKKKRKENNSNSVRSSSSCFYIENNNNDHYSSSSSLYNNNNNNQSGGGYCDINNDQRRQQQSPSNSNANASVHQAENCFPFLMSCEGGTLWDNYSLKVNKPNQNQ* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1581 597 MobiDBLite consensus disorder prediction 282 307 - -
Amo06g1581 597 MobiDBLite consensus disorder prediction 537 561 - -
Amo06g1581 597 MobiDBLite consensus disorder prediction 222 252 - -
Amo06g1581 597 PANTHER - 28 578 - -
Amo06g1581 597 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 28 578 - -
Amo06g1581 597 SMART sant 128 191 IPR001005 -
Amo06g1581 597 SMART sant 425 491 IPR001005 -
Amo06g1581 597 Pfam Myb/SANT-like DNA-binding domain 427 512 IPR044822 -
Amo06g1581 597 Pfam Myb/SANT-like DNA-binding domain 131 217 IPR044822 -
Amo06g1581 597 Coils Coil 331 358 - -
Amo06g1581 597 MobiDBLite consensus disorder prediction 274 312 - -
Amo06g1581 597 ProSiteProfiles Myb-like domain profile. 124 189 IPR001005 -
Amo06g1581 597 Gene3D - 429 494 - -
Amo06g1581 597 Gene3D - 132 194 - -
Amo06g1581 597 CDD GT1 131 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1581 Amo-Chr6 50817183 50820734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1581 9 592 Trihelix Transcription Factor Family AT5G03680 42.971 4.96e-127 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo06g1581 Myb_DNA-bind_4 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1581 - - aip:110263365 775.007