Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1568 GGGAGCTTCGAGAGATTCACTAGGACCTTCAAAATAAGTCCTTGCTCCAAGACTGGCGCCAACTGCAGTCTTGGAAGCAACTTAAAACTCTCGCCACTTCAGCATCGAGCAGTGGCTAGAAAGATAGCCTTTCCCCTTCCCAATACCATCCAAGGTGTTTTAGGAACGGACTTGGACAATATCAAAGCAATGCAGCAAAGGATTGAGGATTTCACCAACCACATGTCTGAACTACTCCGTATTAAAAGGGATGCTGAATTGGAGTTCACTCAGGAGGAATTGGATGTTTTTCCTAGGCCTCTAGATGATGCTTCTGACCCTTCAAAACCGATTGAGTTCTTGGTTAACCATAGCCAGCCTCAGCAAGAACTCTGTGACACCATTTGCAACTTAACTACCATCAGTACCTCTACTGGTATTCTTCTTTTTCCATTTTCTTACGAGTTATCCAAAGATATAGTAGGAAAATATCCTGCCAATTTGATAGAGGTTAATTACCTCAATAAGGAAAATGGCCATCAGAGGGATGCTGGGTCCACTGCATCAACAACTATATTAGTAGTTACATCCCGAGCTGGTACAGCTGTTCCTTTGTCTATCGATCACAAACCTGATAAATCTGATGAGCGTCAAAGGATTGAGGACGCAGGGGGATTCATAAGTTGGGCAGTAACTTAA 678 0.4336 GSFERFTRTFKISPCSKTGANCSLGSNLKLSPLQHRAVARKIAFPLPNTIQGVLGTDLDNIKAMQQRIEDFTNHMSELLRIKRDAELEFTQEELDVFPRPLDDASDPSKPIEFLVNHSQPQQELCDTICNLTTISTSTGILLFPFSYELSKDIVGKYPANLIEVNYLNKENGHQRDAGSTASTTILVVTSRAGTAVPLSIDHKPDKSDERQRIEDAGGFISWAVT* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1568 225 Coils Coil 61 81 - -
Amo06g1568 225 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 33 140 - -
Amo06g1568 225 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 33 140 - -
Amo06g1568 225 SUPERFAMILY PP2C-like 171 222 IPR036457 -
Amo06g1568 225 Pfam Protein phosphatase 2C 188 221 IPR001932 -
Amo06g1568 225 Gene3D - 170 224 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1568 Amo-Chr6 49438426 49441121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1568 166 225 PP2C-type Phosphatase Gene Family AT1G43900 58.108 1.85e-18 81.3