Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1529 ATGTCTCTTCCAAGAGCCACAACAGTAGGCAATAATAAAGATAGCGACGAAGATCTGTTCACAGTTCCTGATGTGGAAACCATGCTGAGTGTGCATTCTACAGCGACAATACAAATAATGCTTCAAGCTGCCGTTGCTGGGAAACGCCGCCGTGGAAGAAACCCTGTAGACAAGGAATATAGACGCCTCAAGAGATTATTGAGGAACAGGGTTTCTGCCCAACAAGCACGCGAAAGAAAAAAGAATTCCAACTTGGAAGAGCGCATCTCCACCTTAATCAATGAGAACACCATGCTCCGCAAGGTAACTGATTAA 315 0.4508 MSLPRATTVGNNKDSDEDLFTVPDVETMLSVHSTATIQIMLQAAVAGKRRRGRNPVDKEYRRLKRLLRNRVSAQQARERKKNSNLEERISTLINENTMLRKVTD* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1529 104 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 8 102 - -
Amo06g1529 104 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 8 102 IPR044280 GO:0000981|GO:0045944
Amo06g1529 104 Gene3D Single helix bin 67 103 - -
Amo06g1529 104 SUPERFAMILY Leucine zipper domain 60 101 IPR046347 GO:0003700|GO:0006355
Amo06g1529 104 Coils Coil 63 102 - -
Amo06g1529 104 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 64 79 IPR004827 GO:0003700|GO:0006355
Amo06g1529 104 Pfam bZIP transcription factor 58 101 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1529 Amo-Chr6 46136921 46145446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1529 47 102 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 68.056 2.86e-24 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo06g1529 bZIP_1 2.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1529 K16241 - gmx:778143 121.324