Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1485 ATGGAAGCGAATGGAATAGGTAGTGGAATTTACACTTGCATAAACACTTCATTGCTAGGAATAGAGAATAACACATTACAGCAAAACCCACACAACAATTTGCATCATCAACCTCCTCCTCCTCAAATGGTTTATTCTACACACCATGACACTGAATCACACCCTTCACAACAGCAACAACAACAGCAACCACAGCAAGCAATGAAACATGGATACCCTTATTCTTCCAAGAAACCACAGAGCAGCACCTTCAGTGATGAAGATGAACCTGGTGGTGGTTTCGGTGCAGATGAAAGCTCTGGTGACCCGAAGAGGAAGGCCTCGCCATGGCACAGGATGAAGTGGACCGACGCCATGGTTAGGCTTTTGATAATGGCGGTTTACTACATCGGAGACGAAGCTGGTTCAGAAGGTGTAGGAGGAGGAGGAGGCGGCGGTGTTGATCCAAGTGGGAAGAAGAAGAACACCGGATTGCTTCAGAAAAAAGGGAAGTGGAAATCAGTATCGAGGGCTATGATGGAGAAAGGGTTCTACGTTTCTCCTCAGCAATGTGAAGATAAATTCAATGATTTGAACAAGAGGTACAAGAGGGTCAACGATATTCTTGGAAAAGGAACAGCTTGTAGGGTGGTTGAGAATCAGAGCTTATTGGAAACCATGGATTTGTCGCTAAAGATGAAAGAAGAGGTGAGGAAGCTTCTCAATTCTAAGCACCTTTTCTTTAGGGAAATGTGTGCTTACCATAACAGTTGCGGCCACGGCGGTGGTGCTGCTGCTGTTACTGCCGCTGGTAACGGGCAGCACTCGGCTGAGGCGGGAACAGAACAACCTTTACAGATTCAACAACCGCAACCGCCACAACATCAGCAGGGACAGCAGAGATGCTTCCATTCATCGGTGAATGGGGTTGGGATGCTGAAAGAGGACGATGATGACGAGGAGGACTATGAATCTGACGATTTCTCTGACGAGGATGAAGAGGAATCAGGAGAAGGTGGTGGATCAAGGGGTCAAGTAGAGGATGATGAGAATGATGTAGTGAGGTCAAGGAAGAGACACAGGAACAAGGGAGGGTTCTGTGTGACGTCATCATCAACATCAGCATCTCAATTGATGCAGCAGTTGAACAACGAGGTTGCTGGGGTGCTGCAAGATGGGGGAAAGAATCCATGGGAGAAGAAGCAGTGGATGAAGAAGAGGGTGCTCCAGCTGGAGGAGCAGCAGGTGAGGTACCATGTGGAGGCCTTTGAGCTTGAGAAGCAGAGGCTCAAGTGGGTTCGGTTCAGTTCCAAGAAGGAGAGGGACATGGAGAGGGACAAGCTGGAGAATGAGAGGAGGAGGCTGGAGAATGAGAGGTTGCTCTTGCTTCTTCGCCAAAAGGAGCTTGAATTCACTGCTCTTCATCACCTCAAGCACCAACAACAGCAGCAACATTCTTCTACCTAG 1446 0.482 MEANGIGSGIYTCINTSLLGIENNTLQQNPHNNLHHQPPPPQMVYSTHHDTESHPSQQQQQQQPQQAMKHGYPYSSKKPQSSTFSDEDEPGGGFGADESSGDPKRKASPWHRMKWTDAMVRLLIMAVYYIGDEAGSEGVGGGGGGGVDPSGKKKNTGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLETMDLSLKMKEEVRKLLNSKHLFFREMCAYHNSCGHGGGAAAVTAAGNGQHSAEAGTEQPLQIQQPQPPQHQQGQQRCFHSSVNGVGMLKEDDDDEEDYESDDFSDEDEEESGEGGGSRGQVEDDENDVVRSRKRHRNKGGFCVTSSSTSASQLMQQLNNEVAGVLQDGGKNPWEKKQWMKKRVLQLEEQQVRYHVEAFELEKQRLKWVRFSSKKERDMERDKLENERRRLENERLLLLLRQKELEFTALHHLKHQQQQQHSST* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1485 481 MobiDBLite consensus disorder prediction 267 299 - -
Amo06g1485 481 PANTHER F16F4.11 PROTEIN-RELATED 1 481 - -
Amo06g1485 481 MobiDBLite consensus disorder prediction 25 108 - -
Amo06g1485 481 MobiDBLite consensus disorder prediction 44 87 - -
Amo06g1485 481 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 481 - -
Amo06g1485 481 MobiDBLite consensus disorder prediction 261 365 - -
Amo06g1485 481 Gene3D - 115 197 - -
Amo06g1485 481 MobiDBLite consensus disorder prediction 331 350 - -
Amo06g1485 481 Pfam Myb/SANT-like DNA-binding domain 112 246 IPR044822 -
Amo06g1485 481 MobiDBLite consensus disorder prediction 139 160 - -
Amo06g1485 481 Coils Coil 431 458 - -
Amo06g1485 481 MobiDBLite consensus disorder prediction 307 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1485 Amo-Chr6 43806985 43809682 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo06g1485 Myb_DNA-bind_4 3.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1485 - - aprc:113863792 488.804