Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1474 ATGGTTGAGTCAACAACAAATGCATTGATGACGATGATGATGGAGGAGGAGGAAGTCATACTAATGTCTTCTAATTCTAATTCCAATTCTTCTTGTTCAGAAGGGTCAGAGGATGATGACCTTGTTAAAGAGCTTTTAGATGATGCCACTCCTCTTCTTCTTCCGCCTTCGGACCACTACAACTCAATAATAAGGCCGCCGCCTTCTTATTTTTCAAATACCGATGATGGTGACGGTGATGATTATGACCACGCCATTAACAGGTTCATATCCAACATTTACTCAGGTCCTACAATCTCAGACTTTGAAAATGCTTTGTCAGTGATCAATAATAGTGACAACCACCCAAGCGATCAGCATTTGGAACACCTCTCATCAGCAAGGGTTTCCATATTGGAAAGGGGTTTGAGTAAAATTGAGAACAAGTATACGCTCAAATTCAAGTGCTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGGAAGTATGGTCAAAAATCTATTAAGAATAGCCCAAATCCTAGGAGCTACTATAGATGCACGAATCCAAGGTGCAGTGCAAAGAAGCAAGTTGAGAGATCCAATGAGGACCCAGACACACTTATCATCACTTACGAAGGTCTTCACTTGCACTTTGCCTACCCTCATTTTCTCACAGGACAACCACACCAATCGCAATCAGATCCTCCAATCAAGAAGCCCAAGCCCATGCCTACAGCTTCACCAGAAAACAAAGCCCAAGAAATTCTAGAAGCCAAGGATGTCCAAGCCAACCCTACTTTGGGCTTAATTCAAACAACTTTAACTGACTCCCAAGAAGATATGGCCAATGTTAATTTGGGCTCACAAGGCCTGCTTGAAGATATGGTGCCATTCATGGTTAGGAACCCCCATAACAATGGCAATAGCACTAACTCACTTTTTTCTTGTTCTTCTCAACCAACTACACCTCCTTCGCTGTGGTTTCCAAATTATTCAACGTCCTGTCATACTGTTGGCTTGAATTTTAGCAATTAG 1020 0.4216 MVESTTNALMTMMMEEEEVILMSSNSNSNSSCSEGSEDDDLVKELLDDATPLLLPPSDHYNSIIRPPPSYFSNTDDGDGDDYDHAINRFISNIYSGPTISDFENALSVINNSDNHPSDQHLEHLSSARVSILERGLSKIENKYTLKFKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPHFLTGQPHQSQSDPPIKKPKPMPTASPENKAQEILEAKDVQANPTLGLIQTTLTDSQEDMANVNLGSQGLLEDMVPFMVRNPHNNGNSTNSLFSCSSQPTTPPSLWFPNYSTSCHTVGLNFSN* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1474 339 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 307 IPR044810 GO:0003700
Amo06g1474 339 ProSiteProfiles WRKY domain profile. 150 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo06g1474 339 Pfam WRKY DNA -binding domain 156 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo06g1474 339 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 32 307 - -
Amo06g1474 339 SMART WRKY_cls 155 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo06g1474 339 SUPERFAMILY WRKY DNA-binding domain 153 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo06g1474 339 Gene3D WRKY domain 151 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo06g1474 339 MobiDBLite consensus disorder prediction 219 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1474 Amo-Chr6 43035170 43038679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1474 63 297 WRKY Transcription Factor Family AT5G43290 42.802 1.11e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo06g1474 WRKY 7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1474 - - aip:107637904 651.744