Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1437 ATGATGATGAAAGAAAGCAATAATAATAAGAAGGCGTACATGGCAGTGATCCTGATACAAGCCATATACGCAGTGATGTTCCTTCTCTCCAAGGCAGCATTCGACCATGGCATCAACACCTTCATCTTCGTCTTTTATAGGCAGGCCCTTGCCACTGTTTTCCTCGCTCCTTTTGCTTTCTTCTTCGAACGCAAAACTGCACCACCTCTCTCATTTCTCACCATCTGCAAGATCTTCTTCCTTTCTCTCTTCGGGATCACGGGGAGCTTGGACGTATATGGTATTGCGCTTATATACACTTCACCCACTTTGGCTTCTGCTACCACTAACTGCCTTCCAGCCATTACCTTCTTCTTGGCACTTTTACTCAGGATTGAAATTCTGAAAGTAAAGACAGCAGCGGGTGTGGCTAAAATGGTAGGTGTGGTGGCATGCTTGTGTGGAGCTGCAACACTTGCTTTCTACAAAGGTCCTCATTTTCAGCTTTTAGGGCACCATCAAATACAACCATCTTCTTCTTCTCCTCCTCCTCCTTCTTCTTCTTGGGTAAAGGGTTGCTTCCTCATGCTCCTCTCTAACTTCCTTTTTGGGATTTGGCTTGTGCTACAGGGTTTTGTGGTGAAAGGATACCCTTCGAAGCTGCGTCTTACGACTCTTCAGTGTTTGTGTAGCTCAATTCAGTCTTTCTGCATTGCATATGGCGTAGAGAGAAGCATTGAGCAATGGAAGCTGAGTTGGAATGTCTCGCTCGTTGCCGTACTATACTGTGGAATAATGGTGACGGGTGTGACGTATTACATACAAACATGGGTGATAGAGAAGAAAGGGCCAGTGTTTCTGGCCATGTCAACGCCACTCGCTTTCATAATCACCGTCGTCTCCTCCGCAATTCTGCTGCACCAGATCGTAACTTTGGGAAGCATTTTAGGTGGGTTACTATTGGTTATAGGACTATATAGCGTTCTGTGGGGTAAGACAAGAGAGGAAATGCCCAAAGTCACAGACTTGGAGGTTGGATCGGAGCATCATCCCCCATTGCCGCCGCAATAA 1050 0.4619 MMMKESNNNKKAYMAVILIQAIYAVMFLLSKAAFDHGINTFIFVFYRQALATVFLAPFAFFFERKTAPPLSFLTICKIFFLSLFGITGSLDVYGIALIYTSPTLASATTNCLPAITFFLALLLRIEILKVKTAAGVAKMVGVVACLCGAATLAFYKGPHFQLLGHHQIQPSSSSPPPPSSSWVKGCFLMLLSNFLFGIWLVLQGFVVKGYPSKLRLTTLQCLCSSIQSFCIAYGVERSIEQWKLSWNVSLVAVLYCGIMVTGVTYYIQTWVIEKKGPVFLAMSTPLAFIITVVSSAILLHQIVTLGSILGGLLLVIGLYSVLWGKTREEMPKVTDLEVGSEHHPPLPPQ* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1437 349 PANTHER WAT1-RELATED PROTEIN 12 330 - -
Amo06g1437 349 Pfam EamA-like transporter family 11 143 IPR000620 GO:0016020|GO:0016021
Amo06g1437 349 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Amo06g1437 349 PANTHER WAT1-RELATED PROTEIN 12 330 IPR030184 GO:0016021|GO:0022857
Amo06g1437 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 327 - -
Amo06g1437 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1437 Amo-Chr6 40134014 40136343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1437 8 256 Nodulin-like Gene Family AT5G64700 61.089 1.08e-95 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1437 - - ccaj:109799350 476.863