Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo06g1403 | ATGCAGAAGCATGGTTACATTAGCGAGTTTAAGTATGTCGATGACTATAGGGCTCGAAAAATTGTGGTTGAATTAAATAAAAGATTGCACAAATGTAGGGTTATCAGTCCCCATTTTGATGTTGGTGTCAAAAAGATTGAAAGATGGACTACTACGCTGCTCCCTTCAAGACAGTGGGGAGGGGTTTGCTAA | 192 | 0.401 | MQKHGYISEFKYVDDYRARKIVVELNKRLHKCRVISPHFDVGVKKIERWTTTLLPSRQWGGVC* | 64 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo06g1403 | 63 | SUPERFAMILY | Ribosomal protein S8 | 1 | 60 | IPR035987 | GO:0003735|GO:0005840|GO:0006412 | |
| Amo06g1403 | 63 | Gene3D | - | 1 | 29 | - | - | |
| Amo06g1403 | 63 | PANTHER | 40S RIBOSOMAL PROTEIN S15A | 1 | 60 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
| Amo06g1403 | 63 | PANTHER | 40S RIBOSOMAL PROTEIN S15A-1-RELATED | 1 | 60 | - | - | |
| Amo06g1403 | 63 | Gene3D | - | 30 | 63 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo06g1403 | Amo-Chr6 | 37238793 | 37239659 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo06g1403 | 1 | 60 | Cytoplasmic Ribosomal Protein Gene Family | AT3G46040 | 76.667 | 6.78e-30 | 100 |