Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1403 ATGCAGAAGCATGGTTACATTAGCGAGTTTAAGTATGTCGATGACTATAGGGCTCGAAAAATTGTGGTTGAATTAAATAAAAGATTGCACAAATGTAGGGTTATCAGTCCCCATTTTGATGTTGGTGTCAAAAAGATTGAAAGATGGACTACTACGCTGCTCCCTTCAAGACAGTGGGGAGGGGTTTGCTAA 192 0.401 MQKHGYISEFKYVDDYRARKIVVELNKRLHKCRVISPHFDVGVKKIERWTTTLLPSRQWGGVC* 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1403 63 SUPERFAMILY Ribosomal protein S8 1 60 IPR035987 GO:0003735|GO:0005840|GO:0006412
Amo06g1403 63 Gene3D - 1 29 - -
Amo06g1403 63 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 60 IPR000630 GO:0003735|GO:0005840|GO:0006412
Amo06g1403 63 PANTHER 40S RIBOSOMAL PROTEIN S15A-1-RELATED 1 60 - -
Amo06g1403 63 Gene3D - 30 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1403 Amo-Chr6 37238793 37239659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1403 1 60 Cytoplasmic Ribosomal Protein Gene Family AT3G46040 76.667 6.78e-30 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1403 K02957 - mus:103999910 98.9821