Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1388 TGTCTCGAGCTTCATTCAAAATTCACGCACGTTCATTCACACTTCACACACGAGCTTCTTCCTCACGAGCTGCTTCTTCTCTGGTCGCACAAGCTTCTTCCGCCGTTGTCGCCGTTCGCATCGCACGATCTTTCTGTCATCCCTTGTGTCGCACGAGCTCCTTTCGCTGCCGCTCTCATCACGTCTGCTCCTTTGGTCGCCATCATTGCAGAGCTCCCTCTGCCACTCTCGTCACGTCTGCTCCCTTCATCGCCGTCGTCACATAGCACTCTCTGCCACCGCTCTTGTCACGTTTGCTCCCTTAGTGAATTTCAGCGATTCGTGAAAAACTCAGCCCAACTCGGTGGAAACTTGGTGCTCAAAATGATAGTTGACTCCGTTGGTAACTTCTTCTCTGGCAAAGACCAGCTTCCCTGGTGTGACCCTGATATCGTCGCTACACAACCTAGTCTTAAAGAACCTTTGCCATGGTCTACCCAGATACAAATAGCTCTGGCTTCAGCCAGAAGACTTGAATATATTCATGAACATATAAAGCCTGTATATATCCATCGCGATATAAACTCGGCAAACATATTATTAGACAAATCCTTCCATGGAAAGGTTGCGGATTTTGGACTAAGCAAAGCTGATTGA 636 0.4827 CLELHSKFTHVHSHFTHELLPHELLLLWSHKLLPPLSPFASHDLSVIPCVARAPFAAALITSAPLVAIIAELPLPLSSRLLPSSPSSHSTLCHRSCHVCSLSEFQRFVKNSAQLGGNLVLKMIVDSVGNFFSGKDQLPWCDPDIVATQPSLKEPLPWSTQIQIALASARRLEYIHEHIKPVYIHRDINSANILLDKSFHGKVADFGLSKAD* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1388 211 Pfam Protein tyrosine and serine/threonine kinase 134 209 IPR001245 GO:0004672|GO:0006468
Amo06g1388 211 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g1388 211 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 150 209 IPR044812 GO:0019199|GO:0045087
Amo06g1388 211 SUPERFAMILY Protein kinase-like (PK-like) 153 209 IPR011009 -
Amo06g1388 211 Gene3D Transferase(Phosphotransferase) domain 1 143 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1388 Amo-Chr6 36011328 36013571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1388 150 209 Receptor kinase-like Gene Family AT3G21630 70.000 6.39e-24 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo06g1388 PK_Tyr_Ser-Thr 1.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1388 - K13429 adu:107496748 106.686